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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit6 _9 L E U, `) R0 z; K. L7 \
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4
n$ ^7 ?. t& a% e" ?% k6->k6 k7->k71 q0 f" @3 J0 @6 ~
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);' e2 A) A) q x* w. G+ P {
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);, j3 Y/ Q! k8 k3 R: i `( f, H) F
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);9 {; H% }; s8 ^( E0 j
% dLadt = k(7)*C(Hmf);) W5 J, L+ ^& r6 s; r# F: K
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
: U/ b1 f! y; r- U0 u9 N, _: u: d/ y$ Uclear all( P+ U6 V" j% F5 ~5 x }5 f. C1 f
clc
" H9 S1 c8 y$ A( I; U3 y6 X/ b9 @format long' D6 `" c1 ]/ r( ]" q
% t/min Glc Fru Fa La HMF/ mol/L 3 @! }4 ?: V' X. ~+ }
Kinetics=[0 0.25 0 0 0 05 F/ s/ b7 @! D) F# H3 w: `% c
15 0.2319 0.01257 0.0048 0 2.50E-04, `3 `/ K M- \5 T1 W6 \
30 0.19345 0.027 0.00868 0 7.00E-04
9 T& j& [6 l* @0 g5 M1 B3 z 45 0.15105 0.06975 0.02473 0 0.0033
1 c! S' L% W) z% d/ f4 m+ Q 60 0.13763 0.07397 0.02615 0 0.004283 h) B* u, @9 z) i! `' N
90 0.08115 0.07877 0.07485 0 0.01405
$ Z# v: L" h" H/ Z( J( y 120 0.0656 0.07397 0.07885 0.00573 0.02143+ V, k- K# k4 A0 O' I) ]8 J
180 0.04488 0.0682 0.07135 0.0091 0.03623% _3 B+ g5 ?# P, Q! i* t3 s
240 0.03653 0.06488 0.08945 0.01828 0.05452
7 E- f0 ^8 i% D6 V1 H, J 300 0.02738 0.05448 0.09098 0.0227 0.0597" q( V' |( x1 O: c4 A2 A+ x" a( z
360 0.01855 0.04125 0.09363 0.0239 0.06495];
: @$ h+ Q2 p, i& G, s# f1 rk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
; U. i) Y, V( j7 z4 ylb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限4 O5 r& [# p1 z f( D# A/ ^3 x
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限2 J) ]# P1 _9 }' y: {( x
x0 = [0.25 0 0 0 0];
# |$ I7 D* y+ s9 cyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]) C- Y/ u% c5 L {0 d" ] _2 q" J
% warning off7 l) D: E; H3 z
% 使用函数 ()进行参数估计& p) _) _) N3 [# |. L- m5 K
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);0 Y! P1 V* P' k$ c4 Q& ] V2 ~
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')5 K! A9 a- {9 |* O: _. f
fprintf('\tk1 = %.11f\n',k(1))' {% h# H3 y& u7 z/ d2 z
fprintf('\tk2 = %.11f\n',k(2)). B. U. r& ?9 o
fprintf('\tk3 = %.11f\n',k(3))
% P, G7 B( X+ `& Gfprintf('\tk4 = %.11f\n',k(4))8 D) p; _, q9 Q& e
fprintf('\tk5 = %.11f\n',k(5))
) } `. }, _: K$ L+ {4 ffprintf('\tk6 = %.11f\n',k(6))
2 l1 G4 R- Q% ^ ~, }fprintf('\tk7 = %.11f\n',k(7))* k4 y4 x# d5 H1 ]* i/ a6 l
fprintf('\tk8 = %.11f\n',k(8))) q2 Z$ ^7 h) r+ E: {
fprintf('\tk9 = %.11f\n',k(9))
) R. u1 \; C5 k: x" N0 V; l Ffprintf('\tk10 = %.11f\n',k(10))
# z" ?, O( R3 Zfprintf(' The sum of the squares is: %.1e\n\n',fval)( V& y2 Z5 A3 r; C& l2 J
k_fm= k;# ]" E9 ~# F& m7 F, o
% warning off* m* @& g s! D0 Y8 i; y, I; z
% 使用函数lsqnonlin()进行参数估计" ]* w2 D9 I9 T2 b5 W6 t
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
" V- l/ m" i$ `. j9 @% B9 k# U lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
- y( M2 t7 A3 [; lci = nlparci(k,residual,jacobian);
9 w" t& U8 e+ e$ `fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')8 i1 H5 ^/ T* T) S6 `1 J3 S
fprintf('\tk1 = %.11f\n',k(1))
" Y3 d# S6 N/ }' u3 zfprintf('\tk2 = %.11f\n',k(2)), ]- @9 b& O; w5 W
fprintf('\tk3 = %.11f\n',k(3)), l0 h8 G8 C2 p$ V. A
fprintf('\tk4 = %.11f\n',k(4)); Z8 {2 {7 o- x! \
fprintf('\tk5 = %.11f\n',k(5))8 T& W7 Z5 ?$ `/ x# O( g8 _+ Y
fprintf('\tk6 = %.11f\n',k(6))* }( \4 M: E) q8 s
fprintf('\tk7 = %.11f\n',k(7))* n7 q% o( w* q
fprintf('\tk8 = %.11f\n',k(8))2 D f$ A3 j6 N; _5 P% S
fprintf('\tk9 = %.11f\n',k(9))5 X/ R c( q1 Q! _' K
fprintf('\tk10 = %.11f\n',k(10))0 c9 e1 I) {$ ]7 T: C1 S
fprintf(' The sum of the squares is: %.1e\n\n',resnorm); F4 g( M }$ j2 W
k_ls = k;# C' t/ M2 `$ T- c! \
output
8 k6 c' |' W: q# q4 |& pwarning off
0 N+ h2 u7 o' ~' D) p# K% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计# i+ o8 V) t# o) U
k0 = k_fm;. H7 t; T4 ?) B: s( N6 x
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
3 c J* v' ]* l: \& ]2 ] lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ' a; j4 Q! }! O! i) b; m
ci = nlparci(k,residual,jacobian);7 ~! }% m3 j+ ]' Y. I
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
, r0 q8 x) b4 E8 n5 Lfprintf('\tk1 = %.11f\n',k(1))8 p: U% e$ k7 O: @
fprintf('\tk2 = %.11f\n',k(2))
0 G7 z' e; v( V# @0 cfprintf('\tk3 = %.11f\n',k(3))
6 {# @7 Q+ e* M+ Nfprintf('\tk4 = %.11f\n',k(4))6 O! q/ q ~* V9 A" f# ^5 o6 @
fprintf('\tk5 = %.11f\n',k(5))/ [. C# q5 d; U1 E+ g2 h; a$ O/ Z
fprintf('\tk6 = %.11f\n',k(6))$ F4 Z1 a+ G2 G8 U) Y
fprintf('\tk7 = %.11f\n',k(7))3 q& h% U9 g+ d
fprintf('\tk8 = %.11f\n',k(8))
" q) f8 |& n; i0 [( x; sfprintf('\tk9 = %.11f\n',k(9))+ o- Q5 u( F- t4 ?
fprintf('\tk10 = %.11f\n',k(10))
( d) J1 o, [5 u( |: h m Kfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
3 \" L. b+ P4 L& h4 [) R7 r3 ` dk_fmls = k;5 t! C) `' s% L% i4 E
output
+ T2 `: L! f& E: U/ U8 Z% D: y7 rtspan = [0 15 30 45 60 90 120 180 240 300 360];
: j+ p p( E- ?' h[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
3 u/ Z/ `; l/ M F7 p- Mfigure;) N2 u7 N2 b- m& u8 r" l
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
. J+ D" ^% K5 ]$ [( _ `% Vfigure;plot(t,x(:,2:5));
; Y/ B0 M) ~# j: X) Q' Cp=x(:,1:5)
9 w# M% a1 B! b _2 C3 ^5 ^hold on W4 Q0 |6 j! E& Q2 H4 S
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
4 Z9 R$ [9 @9 j& u4 X5 @& a
" X- W8 G/ Y; U1 q' v$ C% E: [8 }2 c$ i
1 S+ b2 Y& {; x1 p; h( v
function f = ObjFunc7LNL(k,x0,yexp)
8 Y: ~ b4 M4 O* g& d. itspan = [0 15 30 45 60 90 120 180 240 300 360];
, {* E( V6 [# L4 x[t, x] = ode45(@KineticEqs,tspan,x0,[],k); ! E- t U- d: U( b% K& m& x V- p
y(:,2) = x(:,1);7 Z7 P+ v- [+ T+ ?: `9 R3 d0 c
y(:,3:6) = x(:,2:5);
$ }- Z0 V7 X6 N3 H1 {7 O, Qf1 = y(:,2) - yexp(:,2);# G) m7 x: c0 I% o0 K% |$ K6 q- Z
f2 = y(:,3) - yexp(:,3);9 t! @7 h! M. X% z
f3 = y(:,4) - yexp(:,4);1 h H1 H: X1 H1 y; ]
f4 = y(:,5) - yexp(:,5);
0 e! R- |/ x' s$ ]& uf5 = y(:,6) - yexp(:,6);' {( ^" `0 C8 F, @
f = [f1; f2; f3; f4; f5];% k4 _7 u# }* ^& ]# i9 e
2 j! [$ Y$ E+ {5 E2 {
6 K' w6 N' p2 e' z0 I4 V& {+ ]$ k/ [- ^ C: O
function f = ObjFunc7Fmincon(k,x0,yexp)! S9 H& z8 {9 q: X
tspan = [0 15 30 45 60 90 120 180 240 300 360];
( ?# z# @6 z: b1 I& t[t x] = ode45(@KineticEqs,tspan,x0,[],k); ! e- j* n+ k, j i) R* ?
y(:,2) = x(:,1);
3 ~+ h; }8 ^5 a4 ty(:,3:6) = x(:,2:5);
, c; u) [! z" c- ~1 p. c2 ^f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
" b' _9 E$ H# D* M9 R4 f I + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...2 k8 @( D* A5 X2 w) m( Q# X
+ sum((y(:,6)-yexp(:,6)).^2) ;
1 Q/ ]0 S, ^8 T1 M7 j$ X
/ z& ^8 @5 e) h" D
! }+ _9 d, f R& [0 `8 s* F1 R: P. G% w$ j1 d- e. v* N
, I8 ?/ h8 y; }. I6 q2 {
function dxdt = KineticEqs(t,x,k)0 P% C5 L, o3 N0 Y7 q
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
& _0 H. |; V, O Y2 PdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
) Z7 X7 S }0 o7 z0 O% i4 D: [5 YdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
u1 Z! K4 k7 n1 X) `$ f: UdLadt = k(7)*x(5);3 `: j" P! |: _+ M! g
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
" j7 ^* Z3 D0 w4 ^2 Q8 u" L; vdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];+ k R* W8 |8 l. A3 k
" s8 `0 J' p# F( e1 [8 t& U- |6 O5 o* `2 u+ d6 \
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