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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit0 z5 a+ W# h, x( X/ R
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4- X; R; _6 S2 W2 B# w) G
% k6->k6 k7->k7( a# q( L6 `5 {7 a# f7 F
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);% _/ E0 d& h6 I2 ^3 u( o6 W
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru); x6 I* K' \2 n3 l! a4 z
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
) E, J p% O( t0 j$ ~, B% dLadt = k(7)*C(Hmf);
' g& o+ }0 v8 V$ X# j%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
; I) x7 M* |2 Q/ e! P) z! R: dclear all
' ^- D" g$ c" N. @clc
8 t! H |0 Q9 h3 i, eformat long
+ s) k7 w4 `6 I, l1 i) q. B/ e% t/min Glc Fru Fa La HMF/ mol/L
5 q0 L. `1 W! p( p Kinetics=[0 0.25 0 0 0 0. S; ~/ _* j, f2 |/ N
15 0.2319 0.01257 0.0048 0 2.50E-04, o; v! ]; _2 T# L4 _4 E9 U
30 0.19345 0.027 0.00868 0 7.00E-04
% X7 B4 n9 V$ e' T( Q* Z6 L% X2 w, } 45 0.15105 0.06975 0.02473 0 0.00331 y0 N) H9 ~8 z) d
60 0.13763 0.07397 0.02615 0 0.00428
/ }' C C% K4 c- B) C3 | 90 0.08115 0.07877 0.07485 0 0.014050 a5 F9 P) O) E8 x) H! v0 ^4 @7 m
120 0.0656 0.07397 0.07885 0.00573 0.02143
. [ t, f3 r+ r D" F1 A 180 0.04488 0.0682 0.07135 0.0091 0.036237 n2 Z. e* j; {: A9 n& `
240 0.03653 0.06488 0.08945 0.01828 0.05452
# P6 [4 E7 U" z3 ^! I- G4 E 300 0.02738 0.05448 0.09098 0.0227 0.0597
- v& m' G& H# Z8 K3 b- v 360 0.01855 0.04125 0.09363 0.0239 0.06495]; X2 q; O. }( U' a$ n
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
+ L; Q6 P. i6 M, x4 Mlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限+ N" t5 V' [" W+ V
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
0 a4 T& P5 e* r9 B8 t+ @$ U' i* `" t, }x0 = [0.25 0 0 0 0];
l% u1 l% E# ^; P f: W8 Q7 y# qyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
' V1 \' s o. Z' h; M, R% warning off
( x; u! ^+ p9 w0 N% 使用函数 ()进行参数估计
, Y ]" \4 g3 i% s5 I* i' {[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);8 K4 }2 }# T3 G S2 z. \
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
5 u7 }6 D V3 H( w! V" ]fprintf('\tk1 = %.11f\n',k(1))
/ i1 c& o! Y N5 Z# Dfprintf('\tk2 = %.11f\n',k(2)): ]3 d0 `) O5 s( ^/ I0 X9 d1 y. {
fprintf('\tk3 = %.11f\n',k(3))8 L7 @2 Q+ U! N G& B
fprintf('\tk4 = %.11f\n',k(4))
" @$ @4 {+ `$ @! r: tfprintf('\tk5 = %.11f\n',k(5))
) Q8 O I1 G1 ], O. L0 {fprintf('\tk6 = %.11f\n',k(6))
5 R( A8 |& z: ~4 Q1 W+ M" |) D ~5 L$ yfprintf('\tk7 = %.11f\n',k(7))7 z. L. M# G7 h! d* H3 Y
fprintf('\tk8 = %.11f\n',k(8))
$ x- b9 m/ t3 N* n5 [- N, y7 j- ofprintf('\tk9 = %.11f\n',k(9))
4 F* k( ]# v0 b, xfprintf('\tk10 = %.11f\n',k(10))! E* `2 B: |! O4 R4 H
fprintf(' The sum of the squares is: %.1e\n\n',fval)! r5 V0 N- l. J* H) A
k_fm= k;
/ B+ i' f/ W- w8 N% warning off% q6 H. }! P+ L" V. k* E
% 使用函数lsqnonlin()进行参数估计
& }$ _2 S3 ]+ a w; ~[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
0 a6 Q$ w5 R5 M& e# D lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
" ^! b- ]* T1 pci = nlparci(k,residual,jacobian);0 S8 T! z4 d' i! z5 D+ H5 @8 |
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')& ^9 s0 U2 f; V
fprintf('\tk1 = %.11f\n',k(1))3 W' \5 k; J7 Q! Z) r1 I
fprintf('\tk2 = %.11f\n',k(2))
* @2 A/ B, ], J& h v$ U9 S' cfprintf('\tk3 = %.11f\n',k(3))
3 f# {: y q; Ofprintf('\tk4 = %.11f\n',k(4))
' Q- U8 ?4 U4 C9 Zfprintf('\tk5 = %.11f\n',k(5)); q0 [1 C8 u" _: g$ H
fprintf('\tk6 = %.11f\n',k(6))
& U" O, K, L8 j: F- e: g( p- g: ~fprintf('\tk7 = %.11f\n',k(7))
q2 v; I6 _8 g4 |! @fprintf('\tk8 = %.11f\n',k(8))
+ |- R% W9 V$ jfprintf('\tk9 = %.11f\n',k(9)). @" n2 n1 b! Z) X: t F9 M, r
fprintf('\tk10 = %.11f\n',k(10))
. a( K( R$ P, G: p0 e |: tfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
8 E1 c, l5 l, d; j0 Ek_ls = k;
" S4 ?. r7 }! v# O( r) F" L! Soutput
# X. m; Q r/ T6 c/ q* j/ K& V, a+ Zwarning off
, b1 q& `/ G k$ I* v% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
3 q6 I. o" \# I9 D8 gk0 = k_fm;
9 ]" ]( \4 b* _* h% f3 l3 N[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
N) Z3 }8 {9 L2 a# G9 k lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); t4 z9 A* g+ b* }/ K
ci = nlparci(k,residual,jacobian);( M0 F6 L+ d8 j) `
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
/ [, r! e4 E5 d* Dfprintf('\tk1 = %.11f\n',k(1))( T9 T) L8 q" ^4 w$ N
fprintf('\tk2 = %.11f\n',k(2))
7 J7 w" N( O4 M. V7 q) Cfprintf('\tk3 = %.11f\n',k(3))
" M4 Y; E6 i4 yfprintf('\tk4 = %.11f\n',k(4))' k: i" i" p% P; U/ p4 B
fprintf('\tk5 = %.11f\n',k(5))' a" Y5 E8 w9 E& H# o4 O
fprintf('\tk6 = %.11f\n',k(6))
6 D! L- l4 r4 U1 Y: J' \( bfprintf('\tk7 = %.11f\n',k(7))# l% I1 O( @: R# d) Q6 _* @
fprintf('\tk8 = %.11f\n',k(8))& W7 h+ |, |* A' a n6 |8 Y* A7 ~
fprintf('\tk9 = %.11f\n',k(9))
9 n; C$ i8 J+ ~1 `fprintf('\tk10 = %.11f\n',k(10))& c2 e/ ?6 \$ E+ }) f p
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
f8 g0 D) U$ D' G' l$ `6 C* Xk_fmls = k;
+ [; f, u" w+ @, eoutput0 I3 ~5 D9 {+ D. {9 s1 F2 N
tspan = [0 15 30 45 60 90 120 180 240 300 360];
+ q0 Y5 G( y: x2 X" T8 e0 Y. ~[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
9 q# ~8 J: Q8 m2 A: C- Bfigure;
4 i: j B; T$ ~' Y8 Uplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
1 G1 M# f* e; ~3 q. g. Tfigure;plot(t,x(:,2:5));
0 Y1 \9 e$ K* c- U: z6 l: M+ _p=x(:,1:5)
' g9 Z8 K5 Z' B$ khold on J' P- @3 m3 R9 A
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
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+ I F/ M: a3 c4 I" w f. H2 T$ e9 i
4 p* i: C" {' {+ v
function f = ObjFunc7LNL(k,x0,yexp)' O' T' m9 n& M
tspan = [0 15 30 45 60 90 120 180 240 300 360];9 F# p/ u8 x% p/ _$ }
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); W8 j- \- z/ h5 `1 N
y(:,2) = x(:,1);
4 \6 R6 ^) G: ~( z( e) Ry(:,3:6) = x(:,2:5);, s) n2 f& M5 ^$ Q: f4 k) @
f1 = y(:,2) - yexp(:,2);
- [0 v+ W0 X, v r) m: h0 |& c. s0 ~f2 = y(:,3) - yexp(:,3);4 A" Q. _+ }# G% f8 y+ X( K
f3 = y(:,4) - yexp(:,4);
/ w- N- Z* U# |) }. l& l* w2 \" @f4 = y(:,5) - yexp(:,5);
/ m' E- f4 V" F4 I8 U) E9 r. L7 z" pf5 = y(:,6) - yexp(:,6);
" }* v: ]7 C; }0 d* Z1 n8 \8 Df = [f1; f2; f3; f4; f5];1 W) S0 A! S4 A4 r
# b+ E) i8 J, u1 A$ `8 [% u( A2 i1 Y! n9 a6 A+ J& Q
+ Q* ^, G2 i/ w6 [ n1 f
function f = ObjFunc7Fmincon(k,x0,yexp)
4 [! w" X- y/ M8 \tspan = [0 15 30 45 60 90 120 180 240 300 360];
7 N# W; m( p. E0 D( w. O* w5 @[t x] = ode45(@KineticEqs,tspan,x0,[],k); : l3 J6 ?7 ~$ m) Y! f/ ?' \& I
y(:,2) = x(:,1);
' i2 o; ~2 t( m) m7 ^! ey(:,3:6) = x(:,2:5);
( ]& E# N0 Z+ i* b! `. R; wf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
! d* G# C, i2 g4 q + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...' v; E, A: S! M* t1 t
+ sum((y(:,6)-yexp(:,6)).^2) ;- L' q6 A" D- f
" I( A9 ]! |; F4 I" }5 o
& S0 h& H6 G: G( b% S, B7 i/ k6 K2 d( e
1 @2 O }% B9 J! P: \
function dxdt = KineticEqs(t,x,k)" n9 J* w; i" [# h1 m5 w
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
8 h2 l# X. i5 W, ]- L$ M- zdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
) S4 p6 N( h7 V# [: O& ?4 k) JdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);/ B* a: w4 ^: |; i Y5 B7 \5 G
dLadt = k(7)*x(5);: ~+ j0 L, w& {; j- ?
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
( E- d- T. D( x0 \dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
5 y+ o4 j1 J1 y& R3 u s, R+ ?9 P* ~( u1 M2 I- N/ U! H
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Glc.zip
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