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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit1 V. F/ y$ y; K8 e8 T, t8 w3 n- z
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4
$ b7 V2 F1 ]8 R8 @ }8 ~9 P% g% k6->k6 k7->k7
' S; X! E! a, J9 y% v% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);2 E1 m7 h% Y: ^7 `% i" }
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);! G- L4 b$ k9 z0 a% f
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);, m, {- C# u4 Z# M: H
% dLadt = k(7)*C(Hmf);+ A! z, W$ q6 ^; U: U0 h9 M# z6 E5 a
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf); q. c/ x) \5 p. u3 L
clear all/ ^4 q9 W" A3 D* }0 {8 d2 }& Z
clc
6 G% B: [3 `, O# t5 N. pformat long
$ {* w# D$ B, w$ Z9 S% t/min Glc Fru Fa La HMF/ mol/L a( R9 d8 z& |7 o( b E
Kinetics=[0 0.25 0 0 0 06 W3 V* p0 P( j; W$ s0 Q
15 0.2319 0.01257 0.0048 0 2.50E-04
8 R: x' s8 u5 _" w% L 30 0.19345 0.027 0.00868 0 7.00E-04- p/ {/ S9 \$ g" A, {
45 0.15105 0.06975 0.02473 0 0.0033& p# g9 e, b1 K3 H
60 0.13763 0.07397 0.02615 0 0.00428
( [: Y2 h$ h' A- } 90 0.08115 0.07877 0.07485 0 0.01405
( ^7 l+ ?+ U* m' T4 i3 t8 j! D 120 0.0656 0.07397 0.07885 0.00573 0.021435 T" Z7 Q6 v3 ~- \7 A8 I, w
180 0.04488 0.0682 0.07135 0.0091 0.03623
5 e4 \, B& e/ e/ f7 | 240 0.03653 0.06488 0.08945 0.01828 0.05452
) ` y4 D7 r. r, ?3 y' ^; X 300 0.02738 0.05448 0.09098 0.0227 0.0597/ E( `* y$ h6 [" E1 n1 ^
360 0.01855 0.04125 0.09363 0.0239 0.06495];
+ |- @5 r: @- c. yk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
# a/ q7 T9 y9 U. Jlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限6 _/ o8 N4 v( [9 O
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
7 U% z8 `" x! mx0 = [0.25 0 0 0 0];
' A- x" K" F i# ?; k. T# hyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
@5 i. h( R' Q! {/ e+ r% warning off, w! r% T! O0 m) H) n& h
% 使用函数 ()进行参数估计
) S9 ]7 Z/ s% t: r# g# P[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);, [; h8 U9 I( s: U! @5 Q/ R
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
5 s: ?. n3 l# p& ?8 nfprintf('\tk1 = %.11f\n',k(1)), {- b7 r1 W: k4 G6 J& [
fprintf('\tk2 = %.11f\n',k(2))0 a" Z# W+ }" H' [3 @! o
fprintf('\tk3 = %.11f\n',k(3))
/ I) l6 ?4 I) D# i$ efprintf('\tk4 = %.11f\n',k(4))4 `5 K* k2 D4 h: u0 s
fprintf('\tk5 = %.11f\n',k(5))/ x+ ~$ ^) \' P+ C; K2 `/ v
fprintf('\tk6 = %.11f\n',k(6))
g; ]1 o( K- @4 Jfprintf('\tk7 = %.11f\n',k(7))
E8 s( {; b$ [6 ?: R3 L8 j! @ vfprintf('\tk8 = %.11f\n',k(8))8 Q6 l4 N% D6 N8 O! l q
fprintf('\tk9 = %.11f\n',k(9))1 l* U/ d! v9 m7 K3 R. I
fprintf('\tk10 = %.11f\n',k(10))
7 {/ Q( D" P! q8 gfprintf(' The sum of the squares is: %.1e\n\n',fval)6 q9 I. D" _) X" |1 N5 P$ n2 K
k_fm= k;1 ^4 u1 f/ U/ p2 s( h/ P2 {) f
% warning off" ]$ e9 `4 G1 u, o% S6 T5 I
% 使用函数lsqnonlin()进行参数估计7 j; l: U- y- r, m: L
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
; Y4 z5 p: Z( O lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
' `* ?" l& ]: l+ fci = nlparci(k,residual,jacobian);
2 H- d' U% b efprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')3 e z- C5 d3 \) [& l: Z. F* }
fprintf('\tk1 = %.11f\n',k(1))) u9 R4 i) i+ X3 Y. P
fprintf('\tk2 = %.11f\n',k(2))# C `; I6 u) S5 B( }
fprintf('\tk3 = %.11f\n',k(3))2 b* E* o, l* O/ z
fprintf('\tk4 = %.11f\n',k(4))
6 P9 m; V% O* Y% [$ Bfprintf('\tk5 = %.11f\n',k(5))
" d- v. h1 r0 i4 u8 Ffprintf('\tk6 = %.11f\n',k(6))
' L0 x* y! l, s- Tfprintf('\tk7 = %.11f\n',k(7))
9 M, p1 u7 O. wfprintf('\tk8 = %.11f\n',k(8))8 k! F' x8 [ ]
fprintf('\tk9 = %.11f\n',k(9)); O7 j! j9 b2 W( k
fprintf('\tk10 = %.11f\n',k(10))
2 \' j( {* V& d' g5 I. `% Kfprintf(' The sum of the squares is: %.1e\n\n',resnorm)4 ?6 ~5 O0 R1 \8 h
k_ls = k;0 b1 @9 C' A- }( i& j$ S
output
2 u: M: q# ~) @/ Z( owarning off7 _+ ?& V" ], X( N( `& s
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
1 C) U7 C- X5 j8 s6 hk0 = k_fm;& K7 i% _5 @! K; ~8 W4 E
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
* C8 a0 J7 y$ l0 Q6 A lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ' Z9 }2 x1 Z6 [, A7 f3 F; P4 o( ~- F
ci = nlparci(k,residual,jacobian);
; i' P b( G" \, x. Gfprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')* T& ]/ _$ {0 W. [+ |3 l o
fprintf('\tk1 = %.11f\n',k(1))
+ n! W, L- G1 H- i. ^fprintf('\tk2 = %.11f\n',k(2))8 D7 C0 F8 z1 R$ I! U3 b4 J
fprintf('\tk3 = %.11f\n',k(3))
0 M$ X$ r8 q' y" {7 Nfprintf('\tk4 = %.11f\n',k(4))
8 c8 b3 G& D3 T z1 g n+ Jfprintf('\tk5 = %.11f\n',k(5))
) F- k! `0 E( D0 ?# p$ f3 Lfprintf('\tk6 = %.11f\n',k(6))5 y, c) g* d$ _& v7 Z# V Y; r
fprintf('\tk7 = %.11f\n',k(7)): K( ^2 a( ~6 Z* v+ G8 R7 F
fprintf('\tk8 = %.11f\n',k(8))
3 x' p9 v0 w7 t a2 i- ]: g4 Tfprintf('\tk9 = %.11f\n',k(9))
% S- y6 n% w; bfprintf('\tk10 = %.11f\n',k(10))4 f: I! f6 Z+ M% P$ l' w+ q
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
. V# ]8 I& D+ h+ P. ]k_fmls = k;+ F' y. Z' ~& g' v: O
output
7 }# G% y9 p1 x* o( Q/ k6 ]tspan = [0 15 30 45 60 90 120 180 240 300 360];
% v, ^: _6 ]' y& N+ a0 k- C- l[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
% @& v: e3 x" Q6 d. C! w' Z7 Pfigure;
/ ^$ p" S+ v5 c0 `% y; gplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
4 s' A$ n9 [# {3 ~$ f, |" |figure;plot(t,x(:,2:5));
3 y x/ x) t, a0 w+ xp=x(:,1:5)
/ A* W1 m1 b; m7 l9 h' {* E( vhold on
9 j2 _. E! u, s' x% H4 Iplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
. s9 ?( w# X! f4 a2 H- h- i- Z4 Z) Y# \
( ]$ w" q2 e& w" T: i: }- Q- B& V/ {: ^# _
( t6 s3 r$ u8 b# ?function f = ObjFunc7LNL(k,x0,yexp)
6 k' ^5 P& G. Ltspan = [0 15 30 45 60 90 120 180 240 300 360];9 m9 ]6 l% z3 j( z
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
! Z; k; P0 i: ~7 D0 |& ?y(:,2) = x(:,1);
- Y j3 [# E# S' A5 I; V! g2 ?y(:,3:6) = x(:,2:5);
- E" O8 I6 `! V' j5 `' e5 G T6 Tf1 = y(:,2) - yexp(:,2);
) h6 f' f8 ~8 C5 J0 \3 Z* Yf2 = y(:,3) - yexp(:,3);: d. d* I/ S# R& D( N) |
f3 = y(:,4) - yexp(:,4);
/ ^5 `: k$ {% h' Z% `; tf4 = y(:,5) - yexp(:,5);/ N% _$ s0 `1 v; T, t
f5 = y(:,6) - yexp(:,6);
j- ? L6 Z+ P4 h# A5 Qf = [f1; f2; f3; f4; f5];5 y+ F: l( Y4 I8 k) E6 ?
$ L6 ~) [; I. q: M* S6 q* P$ m! R8 R' m6 k. K
' n m# Z( T2 y$ m5 Z* O
function f = ObjFunc7Fmincon(k,x0,yexp), M+ e* r1 U- }: @/ g& P
tspan = [0 15 30 45 60 90 120 180 240 300 360];3 C" u; @; M8 ~2 O, `! d
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
( U. ^3 X5 p8 v1 ?6 Iy(:,2) = x(:,1);' _. r% P, m( | `) \5 D( v+ ?3 Z O+ q
y(:,3:6) = x(:,2:5);
. x1 `9 m0 R+ O ef = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...4 E7 \/ y# {& m/ E
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...( B# l; Z8 X- }( U
+ sum((y(:,6)-yexp(:,6)).^2) ;( T& \/ Y' m, K5 G8 L8 R
6 X9 N2 e! n7 |# Y, A$ F$ b
5 d/ w z8 K! ]) k2 x. b0 [ T7 [( x2 c+ r
5 U8 H7 K) O6 C2 sfunction dxdt = KineticEqs(t,x,k)4 t; @# m) i' ^# `+ T+ X/ }/ I
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
' R! _* |& I, a. ~2 [3 A8 wdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);6 @# u& E$ W# l1 I0 f+ P
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
- @! g) m* g3 b" |- o) EdLadt = k(7)*x(5);' ^! E; g3 E, i3 p" t
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
) x3 \! _( d0 x* kdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];; n+ z! v& ~4 W
/ W/ d7 _0 \2 ^2 I, n* S5 |
6 y2 R3 h# a: w* v9 |
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