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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit+ e- z2 H6 b! I' m) {
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k43 ~2 b8 a3 z, V
% k6->k6 k7->k7" ~- L' X5 i5 {/ H0 x2 }% P
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
" D7 c4 @2 \1 j0 b* ?+ l1 ?% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
# p. V3 x. w! R( V2 Z% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);1 V1 ?( P. u) y3 G6 g" k) j
% dLadt = k(7)*C(Hmf);" r7 ^" x6 _5 X& q% P9 s1 D+ H
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);! W/ d) G3 ?4 F: Y" c
clear all
2 O5 `) K& u$ Z# d. Jclc
! ^8 Y( c( d- K0 Y: @& @format long
, L+ Q+ u- `2 [4 ?, N% t/min Glc Fru Fa La HMF/ mol/L
# t7 y1 x' D g6 t: w; w Kinetics=[0 0.25 0 0 0 0
4 ?5 B: G4 R4 \' P/ \ 15 0.2319 0.01257 0.0048 0 2.50E-04- w) v! r3 {& |) b" \2 c
30 0.19345 0.027 0.00868 0 7.00E-04
' H1 j; h8 E1 O- Y% J' I- h' _ 45 0.15105 0.06975 0.02473 0 0.00334 [5 ]7 |3 I& d8 P7 W8 I1 B; k
60 0.13763 0.07397 0.02615 0 0.00428
# C, u& H2 H9 x" p 90 0.08115 0.07877 0.07485 0 0.01405& I; A# i6 F0 _8 Z
120 0.0656 0.07397 0.07885 0.00573 0.02143* K4 p: y" ?9 D
180 0.04488 0.0682 0.07135 0.0091 0.03623
3 M. {0 k* T9 E' _ 240 0.03653 0.06488 0.08945 0.01828 0.05452
/ B1 \5 Z3 }; L$ S8 M- L7 C2 j, p, g 300 0.02738 0.05448 0.09098 0.0227 0.0597
$ K* x& K; F3 F! l; H! {9 f& W3 t 360 0.01855 0.04125 0.09363 0.0239 0.06495];
& a# V$ a, k2 bk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值 B: F4 l% v7 a/ P& D
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限6 v# y1 F! _& l* M' _' ?
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
/ O: A! n7 q9 H/ w1 p- Y+ F0 wx0 = [0.25 0 0 0 0];+ D* ^# |; P- R4 R0 _& H. Y
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]2 [3 K# z8 X1 S8 F$ s( S* k* L
% warning off
5 m' P- f6 C$ H9 O2 L/ e) H% 使用函数 ()进行参数估计
! H* z; N. ?/ X[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);5 C! B3 v& o" j' X+ `7 r
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')8 l5 E, h- y. x, h
fprintf('\tk1 = %.11f\n',k(1)): c0 C l7 h9 A. ]* k0 {0 [
fprintf('\tk2 = %.11f\n',k(2))
/ B5 Y6 v( L8 N3 Z) kfprintf('\tk3 = %.11f\n',k(3))/ V* U B9 f. i0 ]( Q
fprintf('\tk4 = %.11f\n',k(4))( s; F, ]9 A5 \3 k9 y
fprintf('\tk5 = %.11f\n',k(5))
2 v( P1 _$ K5 v5 ?# v9 sfprintf('\tk6 = %.11f\n',k(6))
$ s* x5 X" r* w' Y1 h# rfprintf('\tk7 = %.11f\n',k(7))2 o& y- ^$ X9 a+ [- d# @4 J2 e
fprintf('\tk8 = %.11f\n',k(8))
+ ~# r9 \2 W# q8 }3 n2 pfprintf('\tk9 = %.11f\n',k(9))! V$ K9 W0 b- G/ a6 J9 r1 A& X
fprintf('\tk10 = %.11f\n',k(10))
; G* G# S( S9 H9 Y. g$ n4 lfprintf(' The sum of the squares is: %.1e\n\n',fval)
8 k+ A& I9 V* X1 x2 Hk_fm= k;" q+ m6 T, x, `
% warning off
7 J* x1 c0 P7 S1 V5 C! i% 使用函数lsqnonlin()进行参数估计
B- F) f `! |7 |% S[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...- O7 o/ _* t) U( o3 Y5 t
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
7 ^. I! ]0 |" mci = nlparci(k,residual,jacobian);
. D* b8 q [. z$ [% ?* O% s4 F6 k7 ofprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')& T1 i; ?9 V6 s J/ U& l5 h9 a
fprintf('\tk1 = %.11f\n',k(1))" Y; C4 Y, i% F. {
fprintf('\tk2 = %.11f\n',k(2))8 v# d: Y: Z6 S( \: f
fprintf('\tk3 = %.11f\n',k(3))8 h/ i/ v- b( T9 f$ t+ ?8 H) i
fprintf('\tk4 = %.11f\n',k(4))5 ?; A2 K# L0 Z4 m t6 N% c/ k
fprintf('\tk5 = %.11f\n',k(5))& N% e' I h) H
fprintf('\tk6 = %.11f\n',k(6))' T6 N( g& a8 B; y1 _- g/ G3 G
fprintf('\tk7 = %.11f\n',k(7))9 F" W A e. C
fprintf('\tk8 = %.11f\n',k(8))
- S& v% R& q! l) c4 g! ]fprintf('\tk9 = %.11f\n',k(9))9 ^/ c4 h6 F# B& p! R
fprintf('\tk10 = %.11f\n',k(10))- E; U/ X% [: ^2 r: |3 s5 b# H
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)4 }& c; K# x0 Q3 A+ k; z! `* h% p
k_ls = k;
& L4 T0 i1 |8 R+ a: H* youtput
0 w8 B: d a9 d4 w9 gwarning off' o( f. R6 L4 a! ~6 g- H
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
+ A# b; C8 j- C& f. a9 uk0 = k_fm;
# U: Z( P$ v* ~$ e& |[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...' K$ e8 J" d3 n/ O2 T w
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); $ q$ |. }: p! G
ci = nlparci(k,residual,jacobian);4 M' W$ U6 d7 L0 |* P' R) S( A
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
# a7 q; }: y: |& o( V/ Nfprintf('\tk1 = %.11f\n',k(1))3 ~6 N$ z! n. p
fprintf('\tk2 = %.11f\n',k(2))
, y F) y6 `. V9 V& R5 `: zfprintf('\tk3 = %.11f\n',k(3))
/ `: v s8 }, n1 U' t9 ^: ~6 N; zfprintf('\tk4 = %.11f\n',k(4))
8 N! a `0 U* M& H0 F# }fprintf('\tk5 = %.11f\n',k(5))% u0 o/ q2 F( u6 Y; l8 P" |3 y& L. g6 @: `
fprintf('\tk6 = %.11f\n',k(6))$ u' H- v0 u6 b+ A# r( \
fprintf('\tk7 = %.11f\n',k(7))
7 x: ?( H) f; D; \% Ofprintf('\tk8 = %.11f\n',k(8))
' u5 P6 c& g6 s6 H) ufprintf('\tk9 = %.11f\n',k(9))* B3 Q* C: N- z3 z9 a4 O; i
fprintf('\tk10 = %.11f\n',k(10))
' B; F+ H" t% u" e' O g3 [fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
( ?' a& G8 T8 S* Z2 I( S5 ck_fmls = k;
0 J$ T( x% T2 z. V+ Moutput
, ]" J( {( M7 x- j+ xtspan = [0 15 30 45 60 90 120 180 240 300 360];
/ Q4 ? N3 X/ F+ y. l; I: U9 W[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); $ X- m& L) e5 }; ?# T' n# t
figure;
J9 K9 }" J; E3 _! dplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
( @ d$ B1 K1 Z. ]1 hfigure;plot(t,x(:,2:5));1 |8 T& H% `) ~2 r
p=x(:,1:5)% T6 h- ?) t9 j9 a: _( X
hold on
1 j2 z4 R5 b$ s; R% h/ Oplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')* U% }6 o8 z: `9 E2 Y! O
4 ?2 _) U* f# R; v) Z! r
( W( x9 Q; ]9 c; b1 m7 `; m; c
, u0 T3 s2 `0 A/ M8 [5 F \function f = ObjFunc7LNL(k,x0,yexp)# c0 v4 z$ g N8 J) E, f$ p; @
tspan = [0 15 30 45 60 90 120 180 240 300 360];. |5 |' O+ W) Z6 O* {& h
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
; P9 B+ D2 M3 x* |y(:,2) = x(:,1);1 R) [( g/ M, p+ p
y(:,3:6) = x(:,2:5);
- E& ?( K: ~) p! v( u$ C; Vf1 = y(:,2) - yexp(:,2);
. A% r! S1 E, x1 i$ c# j+ ^- ~. tf2 = y(:,3) - yexp(:,3);* ]: m" n/ G2 Q: c/ b. Q
f3 = y(:,4) - yexp(:,4);
( k( u) a1 K6 [' Sf4 = y(:,5) - yexp(:,5);' a2 g' g/ u* B, q
f5 = y(:,6) - yexp(:,6);" e7 h3 r9 m$ ^
f = [f1; f2; f3; f4; f5];
' ^0 a$ b9 w( e* |! o3 [1 O6 `- Y; ~+ S
% K3 Q* z! y( Y" r* g
6 G+ H! }; i/ efunction f = ObjFunc7Fmincon(k,x0,yexp)* \* b, j& _) B* j: p
tspan = [0 15 30 45 60 90 120 180 240 300 360];7 ?! P X/ X3 y6 Q8 ~! B' f9 }
[t x] = ode45(@KineticEqs,tspan,x0,[],k); # e5 b8 N, s, k
y(:,2) = x(:,1);
: |# Q; N7 }5 \3 |y(:,3:6) = x(:,2:5);8 @, H+ s( c; l
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
; ?9 F% }. l8 C" j4 z$ k. Y- _* o + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...8 D8 J4 I% b( M4 F8 l% w/ F
+ sum((y(:,6)-yexp(:,6)).^2) ;% q$ n3 r. K; V9 C( d
! u1 T, c4 {5 E$ @0 S$ z( C( {8 O
3 j# _ i+ K) M- N
! Z; E/ F% e- k b- @1 R
* v* e6 k. O9 r8 w. P" x! Z
function dxdt = KineticEqs(t,x,k) V$ T: f% m' g* i
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
# a7 N4 m6 c z# zdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
' W$ d5 t% G9 k+ {5 v- P- e; Q3 EdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
1 d, V+ v2 T& _& C' T$ j/ S* jdLadt = k(7)*x(5);1 ~* [3 M2 S3 j' b* e" m
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);/ d- S8 |$ z' J+ A6 d
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];" t! F5 }& c2 t; X2 h- V$ S3 x
4 u0 C$ [9 ]- T2 k( ~' T1 F. U* `8 u% a# g
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