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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit# q2 q* j- d: o. Y9 Y& P* Y" O
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k47 m* R7 j4 w# W5 ?$ f" w; k* Y
% k6->k6 k7->k77 V9 q& k X% ^4 k& W. w# _9 o
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
* D E: B% n: U5 ?! k% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);; a7 X4 q7 C( T. ~, r# |2 U
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);9 l. O+ s: ~) L& x* l7 K1 b6 ~8 U
% dLadt = k(7)*C(Hmf);
) }$ ]. g4 U( \ i& L* |%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
1 y9 j! l, I/ b" qclear all
5 \; n$ q: u) Z1 d- ^; `clc
: v" M2 t6 W& qformat long8 ]9 ~' P2 b7 S7 V) J5 o
% t/min Glc Fru Fa La HMF/ mol/L
n a8 T6 |* p4 y Kinetics=[0 0.25 0 0 0 0
2 R* _% ~" u! v, J# N& e. O 15 0.2319 0.01257 0.0048 0 2.50E-04( L8 M% B+ X4 s- i& B/ |3 B
30 0.19345 0.027 0.00868 0 7.00E-04$ e9 {- J& p5 [5 o' n! W
45 0.15105 0.06975 0.02473 0 0.0033
( ?$ `( e( F7 Q8 `! F, U3 X 60 0.13763 0.07397 0.02615 0 0.004288 t H: E8 l, D9 e* H) d# d. W
90 0.08115 0.07877 0.07485 0 0.01405
) z$ j& N1 b- j$ w 120 0.0656 0.07397 0.07885 0.00573 0.021437 b5 _, `: q' {5 O2 Y
180 0.04488 0.0682 0.07135 0.0091 0.03623
( Q( a* s- M7 s, o6 q 240 0.03653 0.06488 0.08945 0.01828 0.054522 J5 {2 m) W$ J+ R; q3 M8 `* c
300 0.02738 0.05448 0.09098 0.0227 0.0597
1 Y7 y+ }4 j# W6 l 360 0.01855 0.04125 0.09363 0.0239 0.06495];
( @7 v9 C$ v3 L8 Mk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
9 T2 F+ ~8 M% s Dlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限. C+ T2 Z0 F9 I# w& m$ s) }
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限! F- \: J4 ^: n
x0 = [0.25 0 0 0 0];" h U: n! Q7 D+ K4 {
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6], u8 U7 e* ?. Z2 e( s
% warning off$ N" S9 K7 m) g+ P) o
% 使用函数 ()进行参数估计
; V+ x1 M% i1 b. `4 }% r[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
* V" b2 ~7 r \- w+ Ofprintf('\n使用函数fmincon()估计得到的参数值为:\n')
) n' m R7 y5 W4 L2 y% ]0 Y( M, mfprintf('\tk1 = %.11f\n',k(1))
' x& S5 ~' M% @- D, G! ufprintf('\tk2 = %.11f\n',k(2))( W, G2 @2 H1 ^; {7 h7 c
fprintf('\tk3 = %.11f\n',k(3))5 F" p4 r4 c+ P6 E0 U5 e5 v
fprintf('\tk4 = %.11f\n',k(4))
; f* u( N' z( G/ U9 zfprintf('\tk5 = %.11f\n',k(5))
6 H8 v+ h+ Y$ @) d, l4 lfprintf('\tk6 = %.11f\n',k(6))
( D0 W5 {+ [6 M2 kfprintf('\tk7 = %.11f\n',k(7))
1 A; I' y( Q" @' |6 r; W- G8 }fprintf('\tk8 = %.11f\n',k(8))( F! h0 Y+ i; n$ G- H
fprintf('\tk9 = %.11f\n',k(9))
. b* Q3 \% b. U0 X! G9 }4 Bfprintf('\tk10 = %.11f\n',k(10))
8 d& u! |6 t( d) r) q9 bfprintf(' The sum of the squares is: %.1e\n\n',fval)" k) ?" [2 @- {0 `2 e
k_fm= k;
2 I. s% x0 y' b" p( b5 O7 l# R# @% warning off3 L/ W0 M% `9 U X$ `
% 使用函数lsqnonlin()进行参数估计
) ?: o' Y( I+ j" Z8 j/ e[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...( B! D$ A# y' f" d- u# y! J) W
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
$ z" Z9 j n7 A3 B/ K; tci = nlparci(k,residual,jacobian);+ k' r( z7 @6 m$ ^7 x
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')3 E5 c6 e, m6 A/ @
fprintf('\tk1 = %.11f\n',k(1))
1 a' L# Q% U& a' G+ X: S5 {. _0 Zfprintf('\tk2 = %.11f\n',k(2))
: t( n2 e0 C9 {; G: w! Ofprintf('\tk3 = %.11f\n',k(3))
. v, s/ e, ?5 d( d. H9 C( ~7 e- nfprintf('\tk4 = %.11f\n',k(4))
) t; _+ `! Q3 x& Q1 P3 Rfprintf('\tk5 = %.11f\n',k(5))+ ]0 Y A: e" Z, @
fprintf('\tk6 = %.11f\n',k(6))1 \: v. u: r" M$ G* E
fprintf('\tk7 = %.11f\n',k(7))
' K5 H0 h; D. x* w2 x; [ ~/ Xfprintf('\tk8 = %.11f\n',k(8))' _0 ^; Y, X' d# G. t
fprintf('\tk9 = %.11f\n',k(9))
% O. |, }8 W; M% X0 t5 X s+ qfprintf('\tk10 = %.11f\n',k(10))4 t5 W" ^! a" ]4 s
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)6 k0 e- O# M* t4 h- `+ }
k_ls = k;
, r+ W) O$ _4 N8 G4 n- R- \, `. a Noutput7 J7 U v$ |, t7 o0 w4 P
warning off9 V9 H( O* j1 i6 n; u2 j8 a
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
6 Z$ h& i3 D4 l8 @4 hk0 = k_fm;
, k' L/ ?7 K0 ~; ]5 u) y, O$ L8 t% U[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...9 g: W- [) j- N: ^+ u
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); # n' Z; T9 C6 s" V! J$ e
ci = nlparci(k,residual,jacobian);& l; k8 W( e- E- K0 K# `" E
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
2 I4 R" L: a3 S. `fprintf('\tk1 = %.11f\n',k(1))
! E& R! f: Q/ yfprintf('\tk2 = %.11f\n',k(2))
1 v0 U# h! `* Sfprintf('\tk3 = %.11f\n',k(3))
* j( Y1 g8 j: y9 L2 C1 A8 u) jfprintf('\tk4 = %.11f\n',k(4))
/ S2 f# h [/ t0 _$ Ffprintf('\tk5 = %.11f\n',k(5))
; ]/ Q2 k2 H6 f9 _fprintf('\tk6 = %.11f\n',k(6)), @6 D6 y( Q6 a1 f. H0 k% s& s! @
fprintf('\tk7 = %.11f\n',k(7))
3 D3 z, j& \4 J" N2 P- zfprintf('\tk8 = %.11f\n',k(8))
- o% |9 X; X; d9 k5 _# O0 dfprintf('\tk9 = %.11f\n',k(9))
9 Y0 Y" y+ }; T# {$ [fprintf('\tk10 = %.11f\n',k(10))
. C3 |% |$ M3 T3 p/ k, Yfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
3 C* {# K7 J4 e0 c. B; ^2 Fk_fmls = k;1 Y; A1 B5 X; c0 `1 J6 p a ?- |
output' u) f7 W w6 O6 C/ H, B
tspan = [0 15 30 45 60 90 120 180 240 300 360];# N0 h4 V" K3 M" z3 D n
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); ( t# G" f9 c% A
figure;, t/ l2 p$ ~/ N8 u0 f* X0 b) E2 J5 N
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
( Q8 C7 q5 C- Xfigure;plot(t,x(:,2:5));
% O0 v5 V5 x1 l3 T# ^0 x' A& np=x(:,1:5): n: \7 M2 U' Y8 A9 W3 P
hold on
# C7 V5 f# F7 S# D& |; W7 B5 Wplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')" r5 ? T/ w1 c. n
4 m- Z! k, m/ [: e$ d% x, h
4 I9 h8 p; P, V% T' T3 D# p% R" b. ?0 `( B! K6 I
function f = ObjFunc7LNL(k,x0,yexp)& K. k5 p& f, R* i' e/ p" }
tspan = [0 15 30 45 60 90 120 180 240 300 360];8 w- `& b4 I* }4 e/ e
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
) {' H P2 E, A# o$ zy(:,2) = x(:,1);
3 k' K! A9 T: d/ C$ v0 py(:,3:6) = x(:,2:5);
8 u, @+ T" s/ `( Of1 = y(:,2) - yexp(:,2);5 \' Z$ C! b" v& H8 ]( R
f2 = y(:,3) - yexp(:,3);
1 _' y" ~7 ~9 h4 if3 = y(:,4) - yexp(:,4);* R6 x) D$ R) Y* N4 E& J
f4 = y(:,5) - yexp(:,5);
( D8 ]5 M1 g( s9 X9 yf5 = y(:,6) - yexp(:,6);; m0 j, J! m; `( B2 g/ N+ ?. w
f = [f1; f2; f3; f4; f5];
5 c* F ~. D# }: i
5 `, Y5 d- ?# I5 M0 D ~% `
) f- {5 ]& e- @' d2 F
! u; L& X- C" r4 a- r8 lfunction f = ObjFunc7Fmincon(k,x0,yexp)4 ~$ C) f- T# e' f
tspan = [0 15 30 45 60 90 120 180 240 300 360];7 m. B8 J4 F/ j3 B& N
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
6 o+ e# I9 ]. b' ky(:,2) = x(:,1);) h& a7 J2 ?5 ], v
y(:,3:6) = x(:,2:5);5 r4 ?# a+ F# r, ^1 R
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...3 K- z( O5 r5 S. _/ }3 h( }* Q
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
" `( l/ A. Y1 N! z2 n + sum((y(:,6)-yexp(:,6)).^2) ;+ l6 ^6 n" i4 s1 [" Q9 T
6 S; e; x2 ?! G( x, o
/ @8 F- e) J* S5 _
/ X2 l m) t& N; C; S/ I
! i0 W- j1 h4 F! e/ P0 Rfunction dxdt = KineticEqs(t,x,k)
7 w2 U- _6 }. g# w ^% @dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);$ @8 K0 S$ S3 t5 a$ ^% Q2 p+ X
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);9 P/ c% ^! @5 O) X' L: y
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
1 {$ F* u& v9 r; L" idLadt = k(7)*x(5);) q: m1 \7 m* Q- o
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
/ o$ _1 N |2 U# U6 j! kdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];5 R* Q$ G7 x7 ]
g& ]4 g- E$ i7 @
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