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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit7 W: i8 o7 v0 A& z6 Y+ I7 h
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4# M5 w6 X9 {$ T/ Y
% k6->k6 k7->k74 n6 n9 K3 D$ Y. n9 f( d
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
% l( h; v$ `3 A, h% P# `% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
4 H/ @4 B- i! q; O4 H% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
1 u' \1 g& Q; k3 V% dLadt = k(7)*C(Hmf);( W8 Y, Y6 E' S; L: E) a
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
( E" E3 m" @7 A! fclear all/ t0 ?; ]' p1 G
clc
& b4 ?" A9 O3 Sformat long
( ]; v8 |* O% P: Y( U8 [- L: y% t/min Glc Fru Fa La HMF/ mol/L
6 V3 |5 |# c$ ^% `3 o' m0 ? Kinetics=[0 0.25 0 0 0 0- `: v" w0 {9 L0 I9 h C
15 0.2319 0.01257 0.0048 0 2.50E-04" K9 B! ?6 o1 s. Q* S+ H( V) ~
30 0.19345 0.027 0.00868 0 7.00E-043 `) X- j8 H0 W* [- Y: I
45 0.15105 0.06975 0.02473 0 0.0033
4 x( m6 K- G+ G& n 60 0.13763 0.07397 0.02615 0 0.00428
5 o+ E. x, n7 ?& F& T+ [ 90 0.08115 0.07877 0.07485 0 0.01405 `% Z' o' U. A+ O8 x8 R3 t
120 0.0656 0.07397 0.07885 0.00573 0.02143
2 M$ x9 ^/ }1 X! ?" q 180 0.04488 0.0682 0.07135 0.0091 0.03623
1 _4 @2 X, R: x 240 0.03653 0.06488 0.08945 0.01828 0.05452
& |* a5 i C( m, Q 300 0.02738 0.05448 0.09098 0.0227 0.0597
% `: P1 Z. ` P, l! K8 N 360 0.01855 0.04125 0.09363 0.0239 0.06495];3 |% `% P! ^0 }" Y5 }- x
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
- n. F9 G2 j6 |) q" J" ~0 B' @! wlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
1 L0 q% h3 D! S% H4 ?$ Q1 W+ b+ bub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
" w* f( F6 T$ Y7 A) Z8 T6 B' Zx0 = [0.25 0 0 0 0];3 c& f/ Q- N0 r( i0 `' ^
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6], E5 t3 R! }% R+ p, \
% warning off: \& F, ~3 S* K5 p- K4 G+ Q
% 使用函数 ()进行参数估计$ B, w0 b& I2 Y5 k
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
; _( }8 l$ C+ G+ S' ~; s5 X0 Ffprintf('\n使用函数fmincon()估计得到的参数值为:\n')
8 u2 Q3 L* U$ T! r" [4 @- \0 }! Bfprintf('\tk1 = %.11f\n',k(1)), q9 a$ ~8 ?* S* L
fprintf('\tk2 = %.11f\n',k(2))
$ q! S4 M& \: g# Nfprintf('\tk3 = %.11f\n',k(3))
! B8 \% d1 _( Z, qfprintf('\tk4 = %.11f\n',k(4))
5 Q6 l; ?1 Z Q! c5 _fprintf('\tk5 = %.11f\n',k(5))
9 X9 e( S/ P7 f( H1 P9 m3 Ofprintf('\tk6 = %.11f\n',k(6))
) Z m, Z, R5 {* k6 @2 `; ?) N' g4 Ifprintf('\tk7 = %.11f\n',k(7))9 M# e8 e6 f$ s. G$ Q
fprintf('\tk8 = %.11f\n',k(8)): g4 F- B8 l+ V# R, ]2 z
fprintf('\tk9 = %.11f\n',k(9))
; R n+ @5 K% G. }/ B; L! Vfprintf('\tk10 = %.11f\n',k(10))* m; W) v& n# D8 A! |' s. Y. o
fprintf(' The sum of the squares is: %.1e\n\n',fval)
8 ^$ g, |5 L( P, \) V" _k_fm= k;
4 X u; u/ s1 t, ?% warning off
. n1 ~ u: ^. ~/ q3 W4 G% 使用函数lsqnonlin()进行参数估计. w* w" h9 N- Z
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
1 j+ j6 A+ n y" R lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
: G* i3 z3 k7 M5 p+ @ci = nlparci(k,residual,jacobian);( U( j j V7 d6 {
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
6 O* [; Y1 o! j$ A2 ofprintf('\tk1 = %.11f\n',k(1))
& K$ S) B- j9 f, Bfprintf('\tk2 = %.11f\n',k(2))0 F- {7 q" d: N" }- D9 I$ @
fprintf('\tk3 = %.11f\n',k(3))! G' a" K' I8 ]) Z9 e" l; N
fprintf('\tk4 = %.11f\n',k(4))
7 c! |0 U) `" q! n% j% v# Vfprintf('\tk5 = %.11f\n',k(5))6 u {0 u# m5 a6 O9 G
fprintf('\tk6 = %.11f\n',k(6))
- @1 [% ]% D0 q5 Vfprintf('\tk7 = %.11f\n',k(7))% H2 u% H$ p& P4 L g; ?2 i$ P
fprintf('\tk8 = %.11f\n',k(8))
2 m4 N) M. R9 ~+ |6 Mfprintf('\tk9 = %.11f\n',k(9))$ R$ ]( c# q: l% n5 g3 f, `0 ^
fprintf('\tk10 = %.11f\n',k(10))
6 S7 E, `8 \0 t+ Ofprintf(' The sum of the squares is: %.1e\n\n',resnorm)
' t `: @5 a. J7 @' L+ R5 bk_ls = k;
& h4 K. M# I4 {4 X( Youtput" o& i, J/ `- o/ _! z
warning off. m3 @4 `. C( H5 h4 E
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计# y1 t! I% L2 R+ b
k0 = k_fm;( f' O# Q9 Q' ~- F4 |3 @3 {
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...6 S4 Z. i8 K7 m6 Y0 k1 n& |! K
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
& {. V! h& _* gci = nlparci(k,residual,jacobian);7 R) [2 C" ]8 h1 ^- ]" G3 C& |; Z' u( s
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
' t% M$ b5 v4 d0 s! t7 Y0 `* ufprintf('\tk1 = %.11f\n',k(1))( a: H2 e! U) a- W/ u7 n5 W
fprintf('\tk2 = %.11f\n',k(2))' Z; g5 [6 @, Y0 ]8 Q3 K- Z$ I
fprintf('\tk3 = %.11f\n',k(3))
- |( G" y& `# b' i" F' tfprintf('\tk4 = %.11f\n',k(4))3 f- r. M& v+ }6 H: v* I
fprintf('\tk5 = %.11f\n',k(5))
- v2 x0 W. c' U! g4 l9 Z. pfprintf('\tk6 = %.11f\n',k(6))
# @$ G$ l; T/ K4 O* [% mfprintf('\tk7 = %.11f\n',k(7))
% q9 G3 J( v! Y$ ~. Wfprintf('\tk8 = %.11f\n',k(8))
1 \/ V$ K' @6 M% [$ |8 dfprintf('\tk9 = %.11f\n',k(9))
5 ?4 m3 }1 o2 ^7 n: a7 R2 Z# r) G% pfprintf('\tk10 = %.11f\n',k(10))' ^' f; k* i! x1 z' E! U' W: H
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)4 h& H8 y C5 ^7 S5 Z+ N
k_fmls = k;- b7 r; K @6 `! Z" x
output
7 D# {" }1 P$ e4 c- Otspan = [0 15 30 45 60 90 120 180 240 300 360];
8 j0 q) y" u' {) n8 p( u[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); ' ]- `8 o& y% D
figure;
( R7 c9 r& l' K- u: s) X! Oplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
- b2 V$ p) G! e5 ^figure;plot(t,x(:,2:5));' P8 g# W) `4 Y0 g/ L' y
p=x(:,1:5)' V5 W' w/ T# ?! m, B3 I0 i! g( d
hold on
' j4 n6 F7 b1 P4 H0 T( Hplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')# n) O# d. ^6 J, R
O+ H Z( i8 Y; K: t) `
9 C* \* v5 a$ }* {# q V& a; \
) i* Q3 k' e- \: f2 S0 Mfunction f = ObjFunc7LNL(k,x0,yexp)
' H u; e' s5 n3 gtspan = [0 15 30 45 60 90 120 180 240 300 360];; l, R) M/ v# ?. p# l4 L) K
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
% o6 v: q$ b) D, ky(:,2) = x(:,1);& G0 j/ Z! I! I/ G* i
y(:,3:6) = x(:,2:5);
# Y: p1 s- a# ]! pf1 = y(:,2) - yexp(:,2);
' y5 i/ [ T. z) w9 I0 Hf2 = y(:,3) - yexp(:,3);
! a) H0 ~$ E( ^2 Z! c# M Pf3 = y(:,4) - yexp(:,4);
3 f. \4 ~3 G6 z" r- p. H: Ef4 = y(:,5) - yexp(:,5);
: z7 B& O! z* Q* U& G) rf5 = y(:,6) - yexp(:,6);+ U) f8 B* Y% ], {
f = [f1; f2; f3; f4; f5];: d+ \. @$ O6 S4 n8 }7 s+ ?6 r
1 G2 ~1 x5 G' V# B O4 G% r. M
7 y. Z1 q+ e2 E# q
2 x X1 X$ Z* f6 g5 T( l9 Gfunction f = ObjFunc7Fmincon(k,x0,yexp)2 p% i% i: Z" j" a5 {* w
tspan = [0 15 30 45 60 90 120 180 240 300 360];0 n# x' R! i1 e+ W* b& |. ^
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
$ l( f+ d: m/ x: V) ky(:,2) = x(:,1);" c+ z# A1 G# o: {
y(:,3:6) = x(:,2:5);5 Q X8 e& G8 R
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...5 B3 k* l) A7 `0 o i* z
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
4 ^/ P! J6 B. w q7 f2 U + sum((y(:,6)-yexp(:,6)).^2) ;' x$ E: A4 E4 q
7 w' f( l! d. A; ^+ A
+ a0 Y1 u8 _% @, s0 s6 ~! u1 U" r$ `8 L C& D" y
5 ?( N6 o7 x2 c4 _5 B
function dxdt = KineticEqs(t,x,k)( {* R9 f; H/ e! s
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);4 y' l) }# U5 q) F2 S$ {
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
$ ?/ h2 n' a& f b9 a* }( [dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
/ y9 c% S# k. s% |5 D- GdLadt = k(7)*x(5);
7 z& t9 x+ q jdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
+ `' a2 q2 V+ g' |# jdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];- ~2 B/ u1 u2 o9 Q' T2 _' t
; v/ v8 R4 m) u% i+ g8 z0 k% B) U5 P" Z( _
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