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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
& R7 r5 y# w9 e3 @ i0 N% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k46 E* ~9 L3 G" Y j
% k6->k6 k7->k70 Q/ l$ o" K9 N0 y! X3 x
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
/ t5 V) i3 X5 V' |" u% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
5 c3 w8 H- }8 V8 G) b$ i) d% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
5 v" |0 Y- K/ A9 e% dLadt = k(7)*C(Hmf);
9 w {$ m7 }- S& ^4 D o3 R%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);+ }# V; ^% Q- @$ D
clear all
- a! \! G" ~& Eclc
7 [: M' S/ L. N: F6 T7 W% b$ j; mformat long
5 C; t$ ^- w% Z: z; l6 @% t/min Glc Fru Fa La HMF/ mol/L
6 w0 y [4 I" Y2 y% A/ h Kinetics=[0 0.25 0 0 0 0
% z/ J; D8 r2 Y8 d 15 0.2319 0.01257 0.0048 0 2.50E-04
( h& i9 t2 U2 I 30 0.19345 0.027 0.00868 0 7.00E-04
' e( j! E ^! t/ H 45 0.15105 0.06975 0.02473 0 0.0033" d+ C2 B- C$ r- V9 r" r$ n" f
60 0.13763 0.07397 0.02615 0 0.00428, t9 Z% l' T6 A8 w, X3 a# O
90 0.08115 0.07877 0.07485 0 0.01405
" a$ t& W5 B$ v* t- j4 V c. z 120 0.0656 0.07397 0.07885 0.00573 0.02143
' e- T1 V |! R. d. K! B! D6 k 180 0.04488 0.0682 0.07135 0.0091 0.03623$ F" P r/ Q- V9 `. U9 Q
240 0.03653 0.06488 0.08945 0.01828 0.05452+ p" @# V3 T4 Z! o; d
300 0.02738 0.05448 0.09098 0.0227 0.0597
& j, [5 M9 {* }2 j9 @" _ 360 0.01855 0.04125 0.09363 0.0239 0.06495];
, l$ @. y% H( n2 b7 ]. vk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值) B h/ c d0 s
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限' C) B% p/ S9 t# o; f) h
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
7 ^$ D6 k" X8 U: Hx0 = [0.25 0 0 0 0];
% T9 [, d! e! G4 q' |yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
0 ?/ G7 y$ x& B5 w" ]0 y; K% A% warning off
, f) \0 E% x# @* c: v2 ^% 使用函数 ()进行参数估计
8 C' L' q" T9 A8 _' C$ Q* r[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
( i0 [9 Z$ B$ {6 s9 j' ^fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
* N# z8 X0 g6 k) m+ o: zfprintf('\tk1 = %.11f\n',k(1)) n7 G7 u) w/ ]/ J9 J( w
fprintf('\tk2 = %.11f\n',k(2))# t* G' G- Z1 [5 ~) L ]
fprintf('\tk3 = %.11f\n',k(3))
' b. h" T) @) \. ]( ]' `# J) \* Dfprintf('\tk4 = %.11f\n',k(4))9 P9 {& G, r& `! r& B0 @1 x
fprintf('\tk5 = %.11f\n',k(5)). M# \5 Q& o$ j. V9 Z
fprintf('\tk6 = %.11f\n',k(6))6 ~4 Q$ ]+ S9 M) `- y5 [5 j8 O4 {: a3 ?
fprintf('\tk7 = %.11f\n',k(7))! m3 o& y2 @# S& B2 y
fprintf('\tk8 = %.11f\n',k(8))9 [2 |. F+ R9 J8 _6 D5 i
fprintf('\tk9 = %.11f\n',k(9))
& E4 o7 e7 u! m; W9 w) r k( {: tfprintf('\tk10 = %.11f\n',k(10))
; i4 [: j( j$ s: ifprintf(' The sum of the squares is: %.1e\n\n',fval)' m6 Q7 v. _% J( K- T
k_fm= k;
/ |2 L! t: g" p& [% warning off
. \- J7 |" T* q3 Q8 f% F n# `4 v0 }% 使用函数lsqnonlin()进行参数估计
$ }2 x( F7 y6 s[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...0 z" {' w, d o3 c
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); 9 h/ A$ K4 g4 n7 v& K" u4 S
ci = nlparci(k,residual,jacobian);
7 p* W& O ?' K& S. n) a6 E% ^* _fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')$ f1 C4 E# C a o H, H* o
fprintf('\tk1 = %.11f\n',k(1))' J7 o& i- F5 r$ R" R- ^4 `
fprintf('\tk2 = %.11f\n',k(2))
0 ~# K8 i8 M, n. C: Dfprintf('\tk3 = %.11f\n',k(3))
9 t! `( K- @/ cfprintf('\tk4 = %.11f\n',k(4))7 V9 j" W: d# E' e1 P
fprintf('\tk5 = %.11f\n',k(5))
- P4 x8 b+ z7 }" S# }6 Bfprintf('\tk6 = %.11f\n',k(6))/ W( ?6 ? q, e1 U
fprintf('\tk7 = %.11f\n',k(7))
6 j1 d0 O, V9 ]2 A2 F7 l3 U9 yfprintf('\tk8 = %.11f\n',k(8))' o. E1 U+ g3 e; }' F
fprintf('\tk9 = %.11f\n',k(9))
* _- q# F/ Z7 R" z3 A$ R* Efprintf('\tk10 = %.11f\n',k(10))9 h1 R1 D6 S6 |$ w) O9 g. q( |9 g
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)$ E. J( }/ k: N: o# M
k_ls = k;, E9 {" s5 X5 q/ x$ w g) @
output
* t$ C/ }" a0 V, n) p* D4 X C" bwarning off# x6 B$ @5 e' L6 f) I
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
5 ~% Q& {/ @) u0 q3 t/ V: xk0 = k_fm;
; y$ P8 o3 K! f6 h/ P[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
7 ?7 k5 c+ }9 k3 ] lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); 4 b0 U3 a) J/ \9 X! `" D1 [
ci = nlparci(k,residual,jacobian);
9 \& e1 E6 F8 t5 h: ]fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
7 |% c* W) ?$ v H- Z& O U# xfprintf('\tk1 = %.11f\n',k(1))7 N4 p* r. w& r" m% k
fprintf('\tk2 = %.11f\n',k(2))8 ~8 o9 r2 i- N) ~. C) X$ Q5 W! e$ F
fprintf('\tk3 = %.11f\n',k(3))9 o8 O. R9 k; e) o. T7 j
fprintf('\tk4 = %.11f\n',k(4))
; ~0 l" S" t1 v4 J. kfprintf('\tk5 = %.11f\n',k(5))! f' c6 ^* W( ]7 d5 { Q9 P" w
fprintf('\tk6 = %.11f\n',k(6))4 q& _3 G# h( |+ P" |
fprintf('\tk7 = %.11f\n',k(7))
; O0 @1 Q& X, z8 x% A: U# F& Kfprintf('\tk8 = %.11f\n',k(8))
5 s2 I3 M+ F' F% g8 ] T! cfprintf('\tk9 = %.11f\n',k(9))
; j @- J9 B; @6 [, p$ t* D9 F# Wfprintf('\tk10 = %.11f\n',k(10))" Y7 O$ j* z" p2 K3 P5 Q( l! e
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
) e5 x D7 |; L8 }7 }, pk_fmls = k;" i6 ~# }( i/ |+ A
output
" h9 N& j0 V( vtspan = [0 15 30 45 60 90 120 180 240 300 360];
6 ]1 t, _+ t5 ][t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); ; v. V3 O0 a! B( h$ w @& e# z3 h
figure;
# |3 a+ O2 m4 P' e6 C8 ^, }! G" kplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
p1 y, g# c0 j$ f7 s2 vfigure;plot(t,x(:,2:5));
$ j& R9 @- T; V! W/ Z. `3 E) ^p=x(:,1:5)
% o1 M8 Y: V2 [0 t1 n/ Ahold on
: k# p: e9 G( |7 s# [) mplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
1 I+ x/ `5 H% L- i' y7 D7 j7 ?. ]; S2 ]& {; C2 K' X
* e( S. O9 F# [& p J+ h
) l6 p$ R% h9 F) Kfunction f = ObjFunc7LNL(k,x0,yexp)& `9 V( y7 u4 |& f* A t: o9 p
tspan = [0 15 30 45 60 90 120 180 240 300 360];
: p. u) v/ ?/ X6 W9 X# m[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
, s+ h' o' ]! E' L! k! ^y(:,2) = x(:,1);# X( t# b$ Q7 p, E* T3 H
y(:,3:6) = x(:,2:5);
- u4 W, s: p* G8 \2 |* Df1 = y(:,2) - yexp(:,2);
5 y3 B9 G# i c& }f2 = y(:,3) - yexp(:,3);
2 V/ E8 m' d1 ~( g, A+ uf3 = y(:,4) - yexp(:,4);/ g1 ^, O$ {' w& e% a2 [: h; K
f4 = y(:,5) - yexp(:,5);
" _8 e8 w/ X' Jf5 = y(:,6) - yexp(:,6);% {$ i6 h. n. q8 x% I
f = [f1; f2; f3; f4; f5];
+ t% F9 U& ^0 V8 v$ k1 a) H
& Q }: G7 S5 F. G+ w6 [
0 t' H4 u; s7 \9 V( h
3 S) n8 G7 F" H3 ]+ a ofunction f = ObjFunc7Fmincon(k,x0,yexp)
+ C- G: g: |$ A& Mtspan = [0 15 30 45 60 90 120 180 240 300 360];) Q8 C; ]# S( X8 E6 U
[t x] = ode45(@KineticEqs,tspan,x0,[],k); ' D2 j5 ^, z0 H+ g8 g
y(:,2) = x(:,1);
8 c# j" |: m7 p; Q$ g* Ty(:,3:6) = x(:,2:5);
7 {. _4 b/ T$ A" c8 N' v! uf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...4 w/ [8 V/ \2 o6 X; c! j# V
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...( E/ z( G7 D& J1 b6 A5 z0 \. x
+ sum((y(:,6)-yexp(:,6)).^2) ;( c7 Q1 w5 L1 I; t1 H; R! K6 H
+ l' E; e* {2 r" h* A5 [
. z0 S" A6 N" n9 A. L
( y& V$ o" ]- a, Y
- ~3 h C# {# l s7 \" Z8 afunction dxdt = KineticEqs(t,x,k)+ m' W- ?; j- l0 F0 D- ^
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);3 i2 R/ a$ R4 v* F; k3 V, A/ Z
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
; z: q9 k: {6 a: C, l, ] i' A5 GdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
: o0 j/ m4 {/ e6 p8 t+ j3 VdLadt = k(7)*x(5);* E, V( D4 a! F7 Z$ e% f
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
3 P2 N3 s7 G' e8 {/ }9 Rdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
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Glc.zip
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