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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit2 d: G/ \( ?' t$ s
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4' c% |7 Z% V# [
% k6->k6 k7->k7
: [# a& q2 s/ M" K7 E* A6 y% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);- Z7 g9 W9 ?- Q! `( Y
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);1 M( k: b- r ?& j9 B. |% k
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
( F" V7 c7 a/ Q; n2 n6 G" v1 w. K% dLadt = k(7)*C(Hmf);
7 Y4 ]4 I: n+ t* W# p%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
& i5 U) m, m1 u. c, l# t3 fclear all
* x B$ P$ L9 Q' f( nclc: E" e5 v0 J2 I1 ^: S) F1 {( P, b
format long
2 o1 Y/ T4 ~+ }: L* D& Q! t% t/min Glc Fru Fa La HMF/ mol/L
# D7 B$ P1 j8 _* F; H6 o t/ H Kinetics=[0 0.25 0 0 0 0
6 M3 R( |' |6 B* H P- x% | 15 0.2319 0.01257 0.0048 0 2.50E-047 p2 q0 W: x* ^& P
30 0.19345 0.027 0.00868 0 7.00E-04/ i. W, s9 n* O; g$ W9 f1 b: ]
45 0.15105 0.06975 0.02473 0 0.0033: {, }- A" n! u7 W; H& E
60 0.13763 0.07397 0.02615 0 0.00428' f! Z8 g# R# q4 c0 E7 p
90 0.08115 0.07877 0.07485 0 0.014053 A' @/ s; U" @1 N
120 0.0656 0.07397 0.07885 0.00573 0.02143
2 Q. K7 P5 `$ N9 Y7 t9 T5 l' {" v 180 0.04488 0.0682 0.07135 0.0091 0.03623
7 t! f7 S4 p' N( ~. d7 I 240 0.03653 0.06488 0.08945 0.01828 0.05452! L6 j! O, u) c# u$ o* o+ P
300 0.02738 0.05448 0.09098 0.0227 0.0597
: t" S+ D3 o; A8 j- Y1 u 360 0.01855 0.04125 0.09363 0.0239 0.06495];% m2 t6 S' b5 X5 g, O9 ^
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
2 O1 {/ S, ]* F5 r/ s6 ?4 P% C _- d4 Tlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
. `$ J* J* f* b, f. p) n1 Xub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限/ h; S- p& i2 I% U5 [6 K- [
x0 = [0.25 0 0 0 0];
a8 T4 p! P4 @. ^( ayexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]/ u9 A0 w# g. ]+ m1 G
% warning off# A9 Q% E# T( k. T3 d4 v
% 使用函数 ()进行参数估计
) o8 P( ~" N9 t[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);, Z( v. D5 N7 j \" Q1 B* m
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
: O0 p/ w! y2 r% {( h' }' S6 Wfprintf('\tk1 = %.11f\n',k(1))
. v+ t4 e/ S u1 w" gfprintf('\tk2 = %.11f\n',k(2))7 ` s* r; O* y5 @2 X
fprintf('\tk3 = %.11f\n',k(3))
8 p3 R" M* h Vfprintf('\tk4 = %.11f\n',k(4))
& N* A/ T* S- t* q! ffprintf('\tk5 = %.11f\n',k(5))
8 L) w, @# M; t# }2 v" Pfprintf('\tk6 = %.11f\n',k(6))
8 g. t# z, M5 @( h# R9 V* ?2 Z5 Zfprintf('\tk7 = %.11f\n',k(7))
1 A; E3 B$ n% v: yfprintf('\tk8 = %.11f\n',k(8))
' w& l! M% a, Z) E* Q2 Dfprintf('\tk9 = %.11f\n',k(9))! k! t9 Q8 M3 n
fprintf('\tk10 = %.11f\n',k(10))& a5 S. x& y1 ]2 q+ E
fprintf(' The sum of the squares is: %.1e\n\n',fval)
$ _4 p8 _' K# R: ~# Sk_fm= k;! k6 \2 R' U. U/ j! H, B. p
% warning off& U" Z/ @$ h3 ?/ b6 u& U4 w! b) r
% 使用函数lsqnonlin()进行参数估计
9 _* c8 d0 x5 i f& |[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...8 R- M( e* W, u* q
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ) C% E* f7 }5 I! x, q
ci = nlparci(k,residual,jacobian);( v3 ]/ }7 P, I- `" r" M: P
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')0 d1 t" J" h% H8 P. u0 G
fprintf('\tk1 = %.11f\n',k(1))2 i' h( X: g1 E2 ]) B1 o
fprintf('\tk2 = %.11f\n',k(2))
F9 k. h, n8 A @fprintf('\tk3 = %.11f\n',k(3))
. L# v* e1 t1 Z) K* Qfprintf('\tk4 = %.11f\n',k(4))' k, K1 O+ e! Q9 ]7 J, J
fprintf('\tk5 = %.11f\n',k(5))
3 X( ^; S: O. w" ` {0 y( Efprintf('\tk6 = %.11f\n',k(6))7 Y8 ]2 W+ F- e, l6 Y- ]+ j
fprintf('\tk7 = %.11f\n',k(7))
# q, Z1 q; t; a% s1 `( \! Afprintf('\tk8 = %.11f\n',k(8))
0 S( H. t: G$ H/ ufprintf('\tk9 = %.11f\n',k(9))
1 V U* _' S" ^3 v) Efprintf('\tk10 = %.11f\n',k(10))+ m1 t" w! t! U5 {7 o
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
9 d$ B* B# b* C% E# a+ vk_ls = k;
. D8 p E( R. e, E6 routput
# x5 f# @) u: ~4 J. J3 y) pwarning off$ q" E7 p5 F. {( k' Q! z6 x
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
{$ q L# p+ a5 s" ~k0 = k_fm;' |. h, h6 r0 m2 \ H$ O! _
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ... \+ d' z+ @7 J2 ^; @
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); . B/ l0 d- m w+ U& ~
ci = nlparci(k,residual,jacobian);
" Y1 w* j |3 m. hfprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
u& T4 h* v" Wfprintf('\tk1 = %.11f\n',k(1))
9 D& V- d8 P; I1 ^6 ^2 afprintf('\tk2 = %.11f\n',k(2))- y0 @! f& c$ n; }
fprintf('\tk3 = %.11f\n',k(3))8 Y! H( q* Z+ d
fprintf('\tk4 = %.11f\n',k(4))
# l, a5 z6 w) Q# @fprintf('\tk5 = %.11f\n',k(5))' N' \+ U3 N$ A( f
fprintf('\tk6 = %.11f\n',k(6))
: @3 m( s( f$ L/ {, b7 |6 Cfprintf('\tk7 = %.11f\n',k(7)): R' a5 } F+ a2 Y
fprintf('\tk8 = %.11f\n',k(8))
0 B/ f1 C8 e2 a" ~* L( X/ y8 ffprintf('\tk9 = %.11f\n',k(9))
, h, t4 {$ E' O: Z7 Q' ~% T" F: f4 Efprintf('\tk10 = %.11f\n',k(10)) E# d; I: O. a" z2 R8 r% d
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)! \* Z$ b9 L, ?
k_fmls = k;/ ?. _. u1 |2 T N2 K6 o& q/ x8 a% g
output
( r; @6 ?3 ]: i7 z+ A& f! O- xtspan = [0 15 30 45 60 90 120 180 240 300 360];* Y9 C' o6 ^% I C8 c
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
) A) k" B& _( U k8 _8 tfigure;
7 Q. y! b$ ~" m- k' }* z) D' N2 ]plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')! |$ @' Q$ a( J
figure;plot(t,x(:,2:5));$ b* f" z f$ Y' N9 G$ L
p=x(:,1:5)* l& D6 G4 |! D+ Y
hold on
/ h1 D7 e* K' G! V: k* D Q9 [- Aplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')* K2 N6 j- U% a. c6 @) m$ p
]4 o0 @& q. m* ^* {- p- C$ S$ |5 p% k% D1 D U% k
: s5 {" X0 D! }$ Y+ l% g( Y; m
function f = ObjFunc7LNL(k,x0,yexp)
) _1 Y" x) u8 x) ltspan = [0 15 30 45 60 90 120 180 240 300 360];( X' Z7 E4 n' i- U8 a1 C) r
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
3 O6 K0 F( Y" @* ]* X: T0 F9 P3 Iy(:,2) = x(:,1);
% \3 D& a" Y- X: gy(:,3:6) = x(:,2:5);
0 P$ n7 j/ W) l( g. s$ x+ \4 S of1 = y(:,2) - yexp(:,2);
. U; f( ?( Z/ R9 q" |3 Gf2 = y(:,3) - yexp(:,3);) T0 n' f+ h7 Y T! u" ~
f3 = y(:,4) - yexp(:,4);
% E5 h" Z2 }1 cf4 = y(:,5) - yexp(:,5);8 Z* j' |4 Z( U8 G( Y* X( G
f5 = y(:,6) - yexp(:,6);
" e3 T2 E7 H1 n* T! k. bf = [f1; f2; f3; f4; f5];
2 R3 R- V5 ~7 N7 e- j" B1 [) V( G7 [; p
- o- d1 r- M+ ~
; E: ^9 ?/ W* o5 O' Ifunction f = ObjFunc7Fmincon(k,x0,yexp)
i2 b0 `6 }) G, y1 l/ |8 otspan = [0 15 30 45 60 90 120 180 240 300 360];
% p* I) e. \+ R7 P& \1 G; \[t x] = ode45(@KineticEqs,tspan,x0,[],k); : ?$ O6 v; z0 K, D1 d, c, r
y(:,2) = x(:,1); y+ f3 H( @2 t: E
y(:,3:6) = x(:,2:5);
' F. u; b5 f; d3 Y8 Pf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) .../ Q, U* G3 y2 x
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
$ G$ J- @2 g; S. x7 P/ A + sum((y(:,6)-yexp(:,6)).^2) ;
/ i3 ?" \$ n$ ^+ f. n1 E/ S! W" l. H+ x8 R
" r |$ S8 {7 `( ~2 j$ b8 T
- G( \) S: z4 d0 w- k, U
) a4 o3 t6 |/ v/ C& F5 B# b% K5 k
function dxdt = KineticEqs(t,x,k)
9 y7 g) H: j8 k4 c' o0 udGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);8 @. w- b; s" U) v! ~: x3 } B
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);7 ^/ m p, N- n; d
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
1 y" `' ]+ C- K+ EdLadt = k(7)*x(5);
! ~& J% Y, _1 I3 \& b) NdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);% ~, T, o. I2 Z5 _# R- c
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];2 v# V4 h/ W: j/ y k/ G4 \
$ z/ Y) O. {9 E! @7 \4 c
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