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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
) O; v7 t2 i- \% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4' ~8 N2 c5 m, B( g9 I
% k6->k6 k7->k7- ]$ y: V' o3 d! S! R
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
) q4 c7 J) c+ K) n, [" V2 c f% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
6 V' l$ n1 a1 x% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
$ x3 |& u$ X# R& {% dLadt = k(7)*C(Hmf);0 B3 q/ }! K# j
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);5 b( k! {, t" f' ]! Y! a; \. d
clear all, f. U: n7 @8 d8 z" X, U
clc) n$ J1 }9 T { j
format long4 ~% a* r+ p/ w0 D0 o4 [5 K: W
% t/min Glc Fru Fa La HMF/ mol/L
* J6 g4 O: Y& I- i5 u3 X/ Q# j Kinetics=[0 0.25 0 0 0 05 d: f" F! q: G- i# e8 k
15 0.2319 0.01257 0.0048 0 2.50E-04
. b1 v, F0 t0 M/ w 30 0.19345 0.027 0.00868 0 7.00E-04
' J' F/ J6 @$ ?; _ W6 C" c7 ?- h 45 0.15105 0.06975 0.02473 0 0.0033
( Q( L. |) n& b- X+ q 60 0.13763 0.07397 0.02615 0 0.00428' P- L, ]7 W7 \5 `$ V! ]* `0 v; a' y
90 0.08115 0.07877 0.07485 0 0.014058 q0 `& z8 H) Y* A% h% G, Q5 Z
120 0.0656 0.07397 0.07885 0.00573 0.02143 l' ~( D0 Y4 r4 t
180 0.04488 0.0682 0.07135 0.0091 0.03623
- H( O- w4 C9 l$ M 240 0.03653 0.06488 0.08945 0.01828 0.05452; `8 m/ s# Q/ k" u+ ?; D+ ~
300 0.02738 0.05448 0.09098 0.0227 0.05977 e- h+ Y& g1 J/ T/ F
360 0.01855 0.04125 0.09363 0.0239 0.06495];
, f' q6 k7 p$ k$ p5 b: qk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值0 k( `! i- i, G5 `: J8 O# {
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
- m1 O- f6 w1 K6 h. Y) }' Y* tub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限, Z) M7 N4 _9 A. N' d' P# t. F
x0 = [0.25 0 0 0 0];- l0 {6 g% r3 ^
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
- u+ E% `/ V L+ Y% warning off
* ~0 s Y* T$ i$ u( P% 使用函数 ()进行参数估计. i& _0 [2 O( q0 t% C% Q+ F% g
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);3 S3 v; d" A ^! F) s8 K
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
# t' Z6 y, k3 v& x( m' S3 f$ i& c# zfprintf('\tk1 = %.11f\n',k(1))
, @5 E7 L# T% d6 R! Ffprintf('\tk2 = %.11f\n',k(2))
: E* V3 ~9 W H# L, sfprintf('\tk3 = %.11f\n',k(3))
, l2 }: E. \. |2 b% A' V6 Ifprintf('\tk4 = %.11f\n',k(4))& i" q( Q9 i# B4 b: g9 h& t6 a
fprintf('\tk5 = %.11f\n',k(5)), M7 h0 @/ L# R' }
fprintf('\tk6 = %.11f\n',k(6))
1 n& n! c- x% r" h. L- Lfprintf('\tk7 = %.11f\n',k(7))
7 m5 L1 ~7 c' t1 D0 J& Q7 @. qfprintf('\tk8 = %.11f\n',k(8))
& i5 M/ H+ O7 ^1 ifprintf('\tk9 = %.11f\n',k(9))
+ J! f- v! ~0 j3 x8 Gfprintf('\tk10 = %.11f\n',k(10))
) }" M8 P' W5 z$ L7 x/ e. ]fprintf(' The sum of the squares is: %.1e\n\n',fval)! F0 H+ {1 o A5 E5 b
k_fm= k;
) U5 I6 | R. J0 \3 X% warning off
7 ]0 s- O5 T( k% 使用函数lsqnonlin()进行参数估计
$ Q+ v D" a3 X7 u, b4 N[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...1 P( l- {& I0 D! K
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
4 q, N$ ]' Z% z! b5 Z9 P) Z5 U. Oci = nlparci(k,residual,jacobian);# L: g6 X9 ~: U! a6 l! n7 y$ J' P
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
! S4 U: i6 \$ U% Bfprintf('\tk1 = %.11f\n',k(1))& D) `4 X/ s* D( r0 N
fprintf('\tk2 = %.11f\n',k(2))
- c* E% G& Y2 D, ^- Kfprintf('\tk3 = %.11f\n',k(3))1 z2 E: [: _" x, U% R
fprintf('\tk4 = %.11f\n',k(4))
" _, G7 [& E! q/ U u1 w9 Mfprintf('\tk5 = %.11f\n',k(5))+ ~. r- O+ s5 m1 i
fprintf('\tk6 = %.11f\n',k(6))/ c) y* n/ M0 o% f. ]5 L
fprintf('\tk7 = %.11f\n',k(7))
* c! }5 H- U- @4 \" \7 zfprintf('\tk8 = %.11f\n',k(8))8 `% x" k$ d/ o0 y9 o$ w
fprintf('\tk9 = %.11f\n',k(9))
, ^% Y) y& [3 b2 w. X3 P% [' Gfprintf('\tk10 = %.11f\n',k(10))+ n4 ?1 E- Z( X" Q
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
4 n. r' f0 u# l" c4 uk_ls = k;
0 j, L& c e0 A+ `- Goutput
2 ?- t. O, R4 d" wwarning off
7 [) h. H6 f0 W, J; ^( ]% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
; Y2 Z( c% C! Y' I# D9 kk0 = k_fm;
7 A1 A1 O) t4 e2 I' s8 Y/ v; {[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
9 W! U/ o( Z1 U( ?2 y lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
& `3 E3 w* m6 s& @$ Kci = nlparci(k,residual,jacobian);4 a8 j! K# G& y# s' Y; v6 j, _
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
. l6 @2 N& u& c8 U8 zfprintf('\tk1 = %.11f\n',k(1))
' B/ k2 k" {6 z3 W+ P1 Y! Lfprintf('\tk2 = %.11f\n',k(2))
/ ?" O) ^4 k- ~8 [) cfprintf('\tk3 = %.11f\n',k(3)); C" L7 @9 y0 s7 V5 c; V* X
fprintf('\tk4 = %.11f\n',k(4))$ g+ r4 u# ], h9 `% e
fprintf('\tk5 = %.11f\n',k(5))* i! f2 p5 w- ^
fprintf('\tk6 = %.11f\n',k(6))3 t6 g2 t3 f/ R+ F! U8 U! @& d* P
fprintf('\tk7 = %.11f\n',k(7))
6 x% L r+ x' E: y$ J/ ufprintf('\tk8 = %.11f\n',k(8))7 w2 i9 I5 L0 ?) [* u- P
fprintf('\tk9 = %.11f\n',k(9))
3 [3 h8 Y7 X! ?% d# b. qfprintf('\tk10 = %.11f\n',k(10))
1 X% A4 C; u: P& jfprintf(' The sum of the squares is: %.1e\n\n',resnorm)3 E4 @6 y9 f% ?
k_fmls = k; _$ r$ {1 ~; Y9 @ d' \# J
output' \- i3 ?) u0 q8 a2 Z, J" H/ ?
tspan = [0 15 30 45 60 90 120 180 240 300 360];
' }5 Y' T6 U/ [3 H! X4 N3 L[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
8 Y- @- N+ I- e3 Dfigure;8 ^1 r0 F" d$ I5 S2 e
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
; u* l/ ?9 |4 a P, o6 e v4 ufigure;plot(t,x(:,2:5));" p/ U7 H, g. z; r# b
p=x(:,1:5)
+ s, W- _4 T2 xhold on: N2 A+ @0 i" U$ u6 b
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
: i1 z. m1 c- V' J$ p+ X/ i8 f. ]0 L) {# ?4 {( E1 j$ h
( u0 L) V# S! A g9 f0 V8 D$ v* \9 T' m2 k- Z
function f = ObjFunc7LNL(k,x0,yexp)
2 Y0 Z3 z. K0 Xtspan = [0 15 30 45 60 90 120 180 240 300 360];: t; L$ I/ {' w8 E/ G: m
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); e; c* B) J. Y5 f+ V- N
y(:,2) = x(:,1);; o3 j. o e/ K7 n; x
y(:,3:6) = x(:,2:5);, R' b3 \$ i# o+ d6 p) a
f1 = y(:,2) - yexp(:,2);
8 z) j6 C8 ~# _; `f2 = y(:,3) - yexp(:,3);
- i6 S' L, |; H* z: Mf3 = y(:,4) - yexp(:,4);
9 |4 l. I( W" U( t0 of4 = y(:,5) - yexp(:,5);
; F/ o/ `+ V* B* |% l) i- Tf5 = y(:,6) - yexp(:,6);
6 S7 u' m- s: {f = [f1; f2; f3; f4; f5];! Q1 q7 D) Q: U" Q% O
$ O4 d/ j; _, I( z1 f5 W' r% I9 ?# U" r* R+ C9 U( v
, X" Q( F% `1 F1 Y1 O( q5 t# j
function f = ObjFunc7Fmincon(k,x0,yexp)* I8 F9 o( }4 x' M
tspan = [0 15 30 45 60 90 120 180 240 300 360];# @ c$ P8 N0 e5 Z0 |1 _3 q3 c1 M
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
8 p8 z/ E: Z; xy(:,2) = x(:,1);. N3 R6 D- j6 L2 l3 ~
y(:,3:6) = x(:,2:5);; |& Q9 {, @0 m2 J
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
1 e2 e% n. m+ Z+ b* ?- F3 ] + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
0 {5 o$ Z$ S, ], x! T+ v. g; L, Q + sum((y(:,6)-yexp(:,6)).^2) ;
. S% R- R) u4 l
. }. E* L- {% F/ O9 I+ B+ o4 o3 g$ m% [' f! v
9 q; m7 ^) I3 n1 i/ i9 C
/ \, p" u1 w2 ~function dxdt = KineticEqs(t,x,k)$ ^" U9 Y" x2 ]# r$ R
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
+ |/ A. w/ {" t4 d* T; BdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);3 V# J' B* C( i' J7 L1 j1 Q
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);) e3 y* _: [+ {4 p$ i. M
dLadt = k(7)*x(5);
7 X4 b. e( Q% Z! o5 w$ ^4 {dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);) |; q* s( `8 I, ]3 {% x/ Z
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
3 d+ c; T* i8 F- J
1 y# r8 a% K! e
4 F3 [; v" m* F |
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Glc.zip
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