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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
6 V/ }) h/ g2 ~% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4: |2 B6 T( I0 c; n$ I# l
% k6->k6 k7->k7 j6 a2 T V0 f* W; _1 z- J9 v
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
% p' j4 W' |; t7 t% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
u" _" l1 d3 B1 N9 P% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);+ G& n( u% w/ U; V+ \( B
% dLadt = k(7)*C(Hmf);; e, {* S4 u5 {* r a# e" ?3 ]
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
: X& q. D6 y: c0 P1 P$ y$ Eclear all2 o$ t! e w9 w4 p8 ~0 f
clc
, b8 L$ E) U1 ?' `$ F' vformat long
3 O$ p2 e5 Z. v, U* i# V5 u/ @% t/min Glc Fru Fa La HMF/ mol/L & ?# m5 G' c" z \; W* O
Kinetics=[0 0.25 0 0 0 0; L5 @& h# W3 C8 K' V
15 0.2319 0.01257 0.0048 0 2.50E-046 r! x, W, H( ]5 O1 D0 n& ], @
30 0.19345 0.027 0.00868 0 7.00E-04! c" Y. @, t: {/ q8 h" F/ w
45 0.15105 0.06975 0.02473 0 0.0033
9 @6 `1 ?7 `# G1 ^+ `; V9 S/ L 60 0.13763 0.07397 0.02615 0 0.00428& t/ S3 j4 x- O" r: d0 v
90 0.08115 0.07877 0.07485 0 0.01405
5 Q/ R" J/ ]: H6 S5 ` L. y5 { 120 0.0656 0.07397 0.07885 0.00573 0.02143& i/ r9 \& c" J% j
180 0.04488 0.0682 0.07135 0.0091 0.03623/ e3 D+ s2 A% k) E, h6 Y
240 0.03653 0.06488 0.08945 0.01828 0.05452
" g; Z- [9 Z5 a' a1 A 300 0.02738 0.05448 0.09098 0.0227 0.0597
- K# B8 b# N- @- i 360 0.01855 0.04125 0.09363 0.0239 0.06495];
4 {' E- ?- z; o/ \5 }/ B' Zk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值# J& N. t7 m' }- {
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限0 O8 ^+ @' x8 w8 n2 M$ d) o) [% L
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限7 ^) U+ t( F1 y5 Y7 x1 y
x0 = [0.25 0 0 0 0];$ \( H' s1 U8 P! R* o4 k& P
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
7 h0 N: i9 ?5 {" U6 C0 o% warning off
% n' t- G( n! @8 y# n8 M/ D+ G% \% 使用函数 ()进行参数估计
- ^2 R& T* {2 p$ M3 ^[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp); B: J( C) ]2 s; @) E+ B
fprintf('\n使用函数fmincon()估计得到的参数值为:\n'), a1 d' g; F+ Z" ?
fprintf('\tk1 = %.11f\n',k(1))3 \8 x" L( n" d9 g
fprintf('\tk2 = %.11f\n',k(2))! w" Q) M' V4 a+ ?
fprintf('\tk3 = %.11f\n',k(3))+ m0 t$ i# |. X- N8 J: m
fprintf('\tk4 = %.11f\n',k(4))+ ]( I" E. v0 W, p0 E" E
fprintf('\tk5 = %.11f\n',k(5))
3 y/ B7 x% Z/ E6 ?fprintf('\tk6 = %.11f\n',k(6))
- [6 F" L& r! t$ F3 W/ V6 r2 h4 ?fprintf('\tk7 = %.11f\n',k(7))
; E7 E! g) H, Ofprintf('\tk8 = %.11f\n',k(8))
y2 r Z4 i; f7 ^9 {8 h3 ifprintf('\tk9 = %.11f\n',k(9))
* C: R+ d' G( Y h7 f' Jfprintf('\tk10 = %.11f\n',k(10))
5 M; u+ K# U) U% |fprintf(' The sum of the squares is: %.1e\n\n',fval)6 h; F$ t/ F! Z, L9 ?" q
k_fm= k;6 |6 ^ z/ `& r' y
% warning off6 w- h$ F" ^7 {! D/ Y- f3 J) n
% 使用函数lsqnonlin()进行参数估计
P2 c8 \& _. u$ ]3 O7 G' o[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...3 a7 j( |3 n4 w4 L- i: q8 D; C o+ ~
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
2 U$ m% o I1 eci = nlparci(k,residual,jacobian);
6 `9 U* d6 B/ {+ A' q2 @: vfprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')* z" t$ J* J8 S& ?
fprintf('\tk1 = %.11f\n',k(1))7 u" P0 Y; c3 s, p
fprintf('\tk2 = %.11f\n',k(2))- A, S0 T1 U2 [: y6 k) C7 _* w
fprintf('\tk3 = %.11f\n',k(3))
) l! D% i4 | N4 C, d& u! |5 g. kfprintf('\tk4 = %.11f\n',k(4))
6 y- T8 L4 C* |. `& Tfprintf('\tk5 = %.11f\n',k(5))
# w3 v# E3 p* e( F4 q @ N) cfprintf('\tk6 = %.11f\n',k(6))
2 s1 k# E+ }, s9 _( ~* _) Q3 {$ _fprintf('\tk7 = %.11f\n',k(7))2 V L) F# K4 v, Y# y
fprintf('\tk8 = %.11f\n',k(8))7 M9 M; [' e! I0 c5 E
fprintf('\tk9 = %.11f\n',k(9))' W' v- z+ b) K1 d/ ?. ~3 U
fprintf('\tk10 = %.11f\n',k(10))
" }7 @, U6 V% r* o8 [4 ?; p' Sfprintf(' The sum of the squares is: %.1e\n\n',resnorm)" O0 m( A/ x" j
k_ls = k;
8 {6 n3 @) p, p( Xoutput, A# z: Q, e9 R+ C3 T
warning off' N# m, H& B; q! A3 R8 R. G
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计8 O. ]# \& F, e' n. P% W
k0 = k_fm;
5 j1 s- a, w s, O+ @8 {5 E! G[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
) Z) O* g3 } {% R lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
% b- x8 @) ~) ?! K' |" ]; mci = nlparci(k,residual,jacobian);
3 E& O! Z, j Z* afprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n'): M5 [9 i. ?2 u9 | O' x* G
fprintf('\tk1 = %.11f\n',k(1))4 |3 l! c( A( L( v
fprintf('\tk2 = %.11f\n',k(2))
0 p9 o j; d7 T2 h- d4 `8 Kfprintf('\tk3 = %.11f\n',k(3))
H4 W1 E' M( D4 Lfprintf('\tk4 = %.11f\n',k(4))% d" x1 H' \( O: i+ `
fprintf('\tk5 = %.11f\n',k(5))% k( P+ q/ _. Z* p
fprintf('\tk6 = %.11f\n',k(6))/ b& D) a+ g( G( @4 E% B7 S$ P0 E
fprintf('\tk7 = %.11f\n',k(7))
: T4 u9 f6 G4 A0 S7 Ufprintf('\tk8 = %.11f\n',k(8))
# ]0 K* c8 u* [ cfprintf('\tk9 = %.11f\n',k(9))
: R2 Z' L" k% t1 V% gfprintf('\tk10 = %.11f\n',k(10))' b3 m% j# x! b$ |" D, O: | T1 x
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
T* P, R H/ Kk_fmls = k;% L! N' |+ o+ s8 f' p
output: w! p- J+ N7 l9 j; L! }( u: V
tspan = [0 15 30 45 60 90 120 180 240 300 360];
2 I9 {4 c2 u% p5 ]0 y% `1 J[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); " u/ G x9 \$ a) g
figure; h0 t( g' a; \4 ^# C' M+ H
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
8 K& T) l' C; j! W4 Cfigure;plot(t,x(:,2:5));
" F9 e3 B9 q7 s7 I ?8 I, v$ Qp=x(:,1:5)9 Y; Y0 w3 g7 }$ V V9 M, r$ p
hold on* N/ X( M' X& i Y3 j: \/ g
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')9 `% S2 q% Y* j0 r7 i4 ]0 L
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o& D& A! a' m& [4 |3 E
function f = ObjFunc7LNL(k,x0,yexp)
4 x2 V* N# G6 ^/ Ptspan = [0 15 30 45 60 90 120 180 240 300 360];! {: s* {6 i) O9 n4 r! B$ {. Z8 ~
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
2 C" F4 s. z( I! x7 dy(:,2) = x(:,1);8 i" \+ s: n5 p. G0 x- `$ N
y(:,3:6) = x(:,2:5);
9 G+ H9 n# ^' d1 g6 M$ ^0 L+ Df1 = y(:,2) - yexp(:,2);% W, _* {0 n( v7 @) M
f2 = y(:,3) - yexp(:,3);, ?' {* p3 ]! u7 p* p8 b
f3 = y(:,4) - yexp(:,4);1 p$ q+ b5 y) s6 n8 F
f4 = y(:,5) - yexp(:,5);2 O; z8 r; ^5 q0 Q$ I" D1 M; x
f5 = y(:,6) - yexp(:,6);
& h2 n# F8 l2 B+ Uf = [f1; f2; f3; f4; f5];$ o; Z$ |# ?: u& |/ M7 P
: f" I1 s4 E, \8 ?4 g# U$ U" j$ G4 l9 f8 J4 a) U. g6 |
/ A$ k' U% y: Rfunction f = ObjFunc7Fmincon(k,x0,yexp)
5 H% R, C8 }: y7 I" Z; qtspan = [0 15 30 45 60 90 120 180 240 300 360];
) Q, u- F9 H6 z( Y: c& t/ |# G[t x] = ode45(@KineticEqs,tspan,x0,[],k); / K- ~7 g) o% X1 p3 x4 q A( v# ~* Z
y(:,2) = x(:,1);
2 X! {8 `# W6 Ay(:,3:6) = x(:,2:5);
* O+ p, w# Q0 }0 Z& E+ ef = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...0 x) y. n- o* H) s* t C4 S% \
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...1 i6 E; Y# g! l
+ sum((y(:,6)-yexp(:,6)).^2) ;/ w' f L9 w2 r0 \
* h7 ?2 `, p# [6 n, I$ ^
+ C3 e: k* H' W8 k% Y% {
* Y& L9 e& s; ]! e& }! D4 X/ P/ w) x2 a/ \8 ^
function dxdt = KineticEqs(t,x,k)& z( [) O% u2 v9 r" g4 j% r2 o; T
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);% [, r, V/ o* w0 i8 T
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
6 C4 i" `) B, F5 q, V0 B0 zdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);0 ~# H! ]. g1 i3 J6 K
dLadt = k(7)*x(5);
& R+ p; ^0 W, O5 s( Q' zdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
, Z1 `" ]3 M- [/ ]$ I; ?! ydxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];! K% L6 l2 l2 y8 W7 S0 X
`4 t. o/ n# `7 t$ E" Y
% f9 F m' u2 W. v; {5 H# M& v |
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Glc.zip
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