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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
: }( M/ ~4 g5 o+ P" |: q5 e' q% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4' I/ ?, L7 m- ]% U
% k6->k6 k7->k7
2 P3 f* \* I( M( s$ I& h2 ~% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc); x. _( a! X' F5 |/ n9 a' p
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);" i3 A$ ~( D. G$ \: U# F
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf); n+ ~+ N( N! y/ |5 f- P3 [) ^
% dLadt = k(7)*C(Hmf);+ x) q4 A& i4 p r0 ^. @) e% x: N6 ]
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);) [+ B. [* u% y, r4 p0 ]0 }/ Q
clear all' ]; k h' A+ o4 W- [+ P' c3 H
clc
! P! Y8 M: g0 t3 V# j4 sformat long$ }5 S# Z& w; {
% t/min Glc Fru Fa La HMF/ mol/L ( v, {' o8 r7 }$ j
Kinetics=[0 0.25 0 0 0 0
2 x- C: Q6 v2 f0 f. e 15 0.2319 0.01257 0.0048 0 2.50E-04" X- g" n# Z: q# b
30 0.19345 0.027 0.00868 0 7.00E-04) p& y$ n) F' [; e
45 0.15105 0.06975 0.02473 0 0.00333 S b2 |/ E: u
60 0.13763 0.07397 0.02615 0 0.00428
- z5 H: M3 L% X* }' h 90 0.08115 0.07877 0.07485 0 0.01405
, N+ d+ p' G: l: C6 L4 L- \% J 120 0.0656 0.07397 0.07885 0.00573 0.02143
, Y! W' H, Z+ b8 u# L/ a& [8 H 180 0.04488 0.0682 0.07135 0.0091 0.03623
h) t" X* O% m+ m# o u+ {, }+ m' d 240 0.03653 0.06488 0.08945 0.01828 0.05452
* ?( u v2 W" m( c+ h 300 0.02738 0.05448 0.09098 0.0227 0.0597+ y" W/ x- a( T6 o5 Z
360 0.01855 0.04125 0.09363 0.0239 0.06495];) ~: L7 `+ n: {3 o' R" j
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
- m2 M1 i; K( o% G7 j& Blb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限/ W1 a0 A( u% G5 g3 b; J
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
1 c7 z6 a9 b4 Lx0 = [0.25 0 0 0 0];$ T! g* C2 |2 o, p) ]: s
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]0 R- C4 V6 W- n" T4 z. ?2 p
% warning off
! ^* X6 k$ \7 p9 W% 使用函数 ()进行参数估计
$ r8 x) @$ \' b6 ]: x& I1 r[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
; Q8 @' i6 O1 F. }! I/ m: R! g3 sfprintf('\n使用函数fmincon()估计得到的参数值为:\n')
" h& n! H" r6 a6 Y) Vfprintf('\tk1 = %.11f\n',k(1))3 U) N q# g* K" G+ y
fprintf('\tk2 = %.11f\n',k(2))2 ~3 k1 T6 u, h, Y% A) ?4 q
fprintf('\tk3 = %.11f\n',k(3))
4 @( f0 c* R2 }9 q) x6 T) ~fprintf('\tk4 = %.11f\n',k(4))4 U- a' O" U7 m9 L
fprintf('\tk5 = %.11f\n',k(5))+ V0 t. q C% `8 P' A" u6 w
fprintf('\tk6 = %.11f\n',k(6))
! t8 P* _9 s8 Q8 mfprintf('\tk7 = %.11f\n',k(7))
# n' @ F2 {, b& R, Efprintf('\tk8 = %.11f\n',k(8))% c% [( H* Z+ v1 L
fprintf('\tk9 = %.11f\n',k(9))* t5 f [) d" K9 W( t/ F
fprintf('\tk10 = %.11f\n',k(10))
f o# ^8 d1 ]# r1 R) bfprintf(' The sum of the squares is: %.1e\n\n',fval)% Z3 A, [# \1 t0 z
k_fm= k;
( [# m$ J1 W7 m, S) U2 J9 m% warning off2 \* Z& _+ I7 ]
% 使用函数lsqnonlin()进行参数估计, z& B" ^9 M" V. h8 h) j
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
* A4 l( L' z( D9 g5 Q; |% r lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
7 X* h; v1 n4 k* N( V0 r4 y& R; Aci = nlparci(k,residual,jacobian);4 v: j) U* X7 \5 m7 [& N- |
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')) G. p' e7 e/ j1 j, v9 Z& f* \
fprintf('\tk1 = %.11f\n',k(1))
- Q3 k/ Y% f9 I: }9 s; `fprintf('\tk2 = %.11f\n',k(2))8 y3 Y. c4 M1 Z1 a# o
fprintf('\tk3 = %.11f\n',k(3))
! A. _1 Q. B' x) h/ g, t& X" bfprintf('\tk4 = %.11f\n',k(4))! P+ G6 E% L- ~9 X* i$ Z6 b4 W3 J
fprintf('\tk5 = %.11f\n',k(5))& c- _" X' O) f q" g {' b
fprintf('\tk6 = %.11f\n',k(6))$ ~, [8 V8 o/ }1 [! I
fprintf('\tk7 = %.11f\n',k(7))2 g! c! h, ~3 F' Z. D
fprintf('\tk8 = %.11f\n',k(8))
) g" \# b# y. a6 }fprintf('\tk9 = %.11f\n',k(9))
D# g! @- @6 P# Afprintf('\tk10 = %.11f\n',k(10))
% e8 I' Q% |1 C' J( o; hfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
) o" y! {7 V' F9 W/ O D% ^. l* wk_ls = k;% A0 k; ?) y8 k
output: X k2 q: x9 O- B
warning off
( W7 |) h& F$ A2 p. r% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
3 L5 Z0 c- R% H0 P( }/ Jk0 = k_fm;- n5 O) f% J" Z u* K3 X8 C0 X
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
8 o; Z, Z6 m$ _2 i4 S lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
8 V% ~0 [8 h. P+ y( R. G' ^ci = nlparci(k,residual,jacobian);7 J* N. m1 {7 h5 O/ b
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')- x0 R( j7 d) I) E9 d: ^
fprintf('\tk1 = %.11f\n',k(1))
5 O, o; Z$ k* {7 V6 @fprintf('\tk2 = %.11f\n',k(2))& U6 k0 i, w2 P# `0 S. `( h: e) f
fprintf('\tk3 = %.11f\n',k(3))
4 s5 K' S7 N# H% b nfprintf('\tk4 = %.11f\n',k(4))
, c, b1 w+ a- W" p" R! s% D8 d3 Ifprintf('\tk5 = %.11f\n',k(5))# o! w: S' ?5 P0 P b2 @- f
fprintf('\tk6 = %.11f\n',k(6))* }+ T; W" i3 P \6 R
fprintf('\tk7 = %.11f\n',k(7))
2 O8 R/ H* s' }5 E7 Jfprintf('\tk8 = %.11f\n',k(8))# q) w# ]# Y$ V6 q/ {, ]9 h0 T
fprintf('\tk9 = %.11f\n',k(9))
, k# j. X" C. q4 }# l5 a Tfprintf('\tk10 = %.11f\n',k(10)); \/ w9 G' B, t! l7 y& `
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)( C3 V. `6 e- ?# O! ^2 F; P
k_fmls = k;
' s8 P, v- [! X2 U5 O9 F1 E2 |output
! z8 A# D3 j0 ^+ M% u) I0 Etspan = [0 15 30 45 60 90 120 180 240 300 360];
* I2 L2 b% v3 F0 N* i1 E; |[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
$ K9 b2 P2 }. N$ ?figure;% i |" [* P4 [* L- V; e2 B8 S
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
* v( j. g9 b2 v9 N1 q% sfigure;plot(t,x(:,2:5));
9 V& b5 ` L6 f9 f0 @2 Wp=x(:,1:5)$ ]! L: F, L" t% ], n5 R2 C, k
hold on# O+ k4 ]4 p7 N/ P- n/ Z+ E5 ~) |
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
3 L4 Q) g+ [6 d& q: Y0 ^) K
" A f% O r# ^: W& i3 u/ w- P- a O3 G0 a9 Q, F$ H$ @
5 e6 D. V9 L0 b
function f = ObjFunc7LNL(k,x0,yexp)
4 J# G' P0 v" D, ?% Ttspan = [0 15 30 45 60 90 120 180 240 300 360];
- f. |- Q! P7 I; T" o0 |[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
) b0 f( [, z$ A) Y; \1 cy(:,2) = x(:,1);
; h8 L4 _% U' `: I, X5 ?y(:,3:6) = x(:,2:5);
( {0 i6 u& E2 ]# I9 m1 U4 sf1 = y(:,2) - yexp(:,2);
, h7 }9 h5 ]; E1 H. C( t k0 Pf2 = y(:,3) - yexp(:,3);7 {, Q/ k4 y* }' A3 b% U
f3 = y(:,4) - yexp(:,4);( c7 j' g; i* |2 @" ?
f4 = y(:,5) - yexp(:,5);& K! N$ j* E& N; ~
f5 = y(:,6) - yexp(:,6);
) Q% P9 U8 \/ m0 H2 D) ]" xf = [f1; f2; f3; f4; f5];$ C! e* s5 p0 |( `5 Z( L0 ]
, {2 n- u2 L: @! x0 b! }, e
! _. ]/ r m: g
3 z( p, g9 ^2 Z* `function f = ObjFunc7Fmincon(k,x0,yexp)7 Z3 i3 r4 R! B4 P
tspan = [0 15 30 45 60 90 120 180 240 300 360];
( v, E( W" [, L2 l2 w# G6 F9 I[t x] = ode45(@KineticEqs,tspan,x0,[],k);
0 t& i& w" Q* h* O/ Z& Yy(:,2) = x(:,1);/ n4 K: j+ {" N* e$ ~/ J
y(:,3:6) = x(:,2:5);
; l& E' S/ s5 e2 k: w9 j6 Jf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...! i' J t* ?: C- F& ~& O
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...2 b5 I+ K8 u7 d3 x0 z* Z
+ sum((y(:,6)-yexp(:,6)).^2) ;2 [; h' x( N/ ~1 B/ A t- R
; k$ S( H3 W& ?8 p
, Z) P) B0 h! @5 {
( D7 J1 l% s3 U% u
1 A, I, {+ z4 v, m& a' T! _function dxdt = KineticEqs(t,x,k)& _ B# V$ t, v9 o& e2 ]& N
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1); E: ~* L# T0 k2 u) g3 v
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
) V: Y0 b6 u3 w' ]1 F, F/ e" BdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5); ~# f- ]# j2 G6 _' j$ A: v3 N
dLadt = k(7)*x(5);
6 u( |6 @/ J1 L/ d% `$ s" ldHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);% G+ y3 {# e' R# W; L4 `" _. `. p
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];) \, j4 W7 }+ q0 ?( G9 t
9 J5 l1 W0 E" v2 C0 _
9 J' [5 Z: _$ h' s
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