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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit- t/ | e2 Y, z5 Q9 o, z
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4) B1 P3 L( g! ?1 d1 `7 S$ N4 g
% k6->k6 k7->k7
) [8 w, M6 f& z. L) p# W) O% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);7 u1 ^" `6 {. o1 g, \8 {6 T! Z4 e
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
* r$ ~6 [2 X% y% P/ ?% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
+ I2 C3 Q3 H g+ T0 j! L; u/ r% dLadt = k(7)*C(Hmf);
# P9 u N1 |% _% o6 N2 c. N%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);' W& c- b) k9 |
clear all
. |# N; `' r. h2 O5 w; uclc) V$ z! I3 k) N( J* Q- {+ L
format long" o1 C! q( e; I
% t/min Glc Fru Fa La HMF/ mol/L 8 ~$ v( y4 r1 V) h! b- d! n
Kinetics=[0 0.25 0 0 0 0- {" |# W& R" G/ _. a8 I7 a
15 0.2319 0.01257 0.0048 0 2.50E-04
; g8 l: d+ H$ z9 _& X- d 30 0.19345 0.027 0.00868 0 7.00E-04
( ?% k1 J8 N3 ~" X* m 45 0.15105 0.06975 0.02473 0 0.0033
s2 g. ]( h% H E1 E( ] 60 0.13763 0.07397 0.02615 0 0.00428
- s1 i1 e. W! u; z 90 0.08115 0.07877 0.07485 0 0.014058 Q& f6 R8 I0 X
120 0.0656 0.07397 0.07885 0.00573 0.021435 ~; K! {4 r* J3 A
180 0.04488 0.0682 0.07135 0.0091 0.03623* e3 S0 i8 }8 e* w5 d% h' V
240 0.03653 0.06488 0.08945 0.01828 0.054529 o1 I; f* z0 {% v- O
300 0.02738 0.05448 0.09098 0.0227 0.0597
9 u/ y7 i5 B9 o% R d6 U/ f: J7 P" F 360 0.01855 0.04125 0.09363 0.0239 0.06495];7 h- E4 W5 M* x( l- M3 n( D; b
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值$ ^" n$ n$ ~3 [! B e F
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
7 ~; n: C- u2 z+ j' E: C p# Eub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限5 l9 z6 n1 E8 e- S3 N( R6 F0 W
x0 = [0.25 0 0 0 0];
5 H( k# t3 t: d8 `; s/ F) g) X2 Gyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]/ M# {7 _+ e h% [4 Q% s& W
% warning off% k& Z8 I( }8 o5 W# |$ h$ U
% 使用函数 ()进行参数估计
) T0 q1 t% m, Z' J3 q% [* ~[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);8 j( Z' u& l' t V% C
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
* y3 w8 p; k2 c$ E2 S' Kfprintf('\tk1 = %.11f\n',k(1))
) }# U" s9 M, I0 ?0 J& p3 L* ~8 _fprintf('\tk2 = %.11f\n',k(2))
6 B/ g$ X7 x) wfprintf('\tk3 = %.11f\n',k(3)): C7 P* l P' Y- k0 o! q
fprintf('\tk4 = %.11f\n',k(4))
3 v+ I, k* R) z% T: C- Q$ gfprintf('\tk5 = %.11f\n',k(5))
1 F% g8 X: c) y: [. L1 o! r- Kfprintf('\tk6 = %.11f\n',k(6))* {7 Y3 m* l. z- X4 \- F9 M
fprintf('\tk7 = %.11f\n',k(7))9 [7 x! W7 y j( A
fprintf('\tk8 = %.11f\n',k(8))
0 _% r+ g% A& o; D. k1 F: ^fprintf('\tk9 = %.11f\n',k(9))
Z; D) T4 F$ `fprintf('\tk10 = %.11f\n',k(10))+ p0 p& n0 m; ~5 R. u/ y
fprintf(' The sum of the squares is: %.1e\n\n',fval)
' E9 X2 Y7 W: \1 Ck_fm= k;2 {3 f* ~6 ]( G# Q. q0 n; f/ l
% warning off5 a% }! x: u7 f" k+ k
% 使用函数lsqnonlin()进行参数估计9 G% f3 i* C$ ^' M
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...' O5 w. }" m3 Q T0 g p" A( O% b
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
# R8 K' i' ^8 M' G! r) p. J3 R, Ici = nlparci(k,residual,jacobian);! z, C3 N6 y, j9 P6 G
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')- p1 P+ {+ i$ X& |. s
fprintf('\tk1 = %.11f\n',k(1))
1 f1 ^& I( p$ K9 m/ M: ufprintf('\tk2 = %.11f\n',k(2))8 |$ O* e! C) |/ x
fprintf('\tk3 = %.11f\n',k(3))
; ~2 Y! N* X( f* l4 ^fprintf('\tk4 = %.11f\n',k(4))+ T# P- I5 X5 x4 ]) K# R# f
fprintf('\tk5 = %.11f\n',k(5))( S( J( K) J; M
fprintf('\tk6 = %.11f\n',k(6)); g0 E8 }: x3 x" N5 I8 b
fprintf('\tk7 = %.11f\n',k(7))' L$ R: w N; M5 g0 s3 G5 B
fprintf('\tk8 = %.11f\n',k(8))
! t- [. [0 d( r! X$ bfprintf('\tk9 = %.11f\n',k(9))
. P& m% r2 {: K7 w8 A zfprintf('\tk10 = %.11f\n',k(10))
+ \; R" O0 X% Gfprintf(' The sum of the squares is: %.1e\n\n',resnorm)& t7 j' S+ J9 S
k_ls = k;1 o% m) x6 u. n4 Q
output
! ~, n: i r( N7 {1 fwarning off
! [6 V" u* E8 Y$ a* c# z/ _1 u. |% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
- H6 Z8 [/ o) X" qk0 = k_fm;" d! L- r7 o8 O: U
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
+ s; |) ^3 w4 {* A8 o3 z lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ' W3 @# u8 y' C5 P$ U; S
ci = nlparci(k,residual,jacobian);
. {* `, [9 ]4 z& q+ Q% O8 x* p- Ufprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
8 w: p' |7 u. ]5 F3 ^+ jfprintf('\tk1 = %.11f\n',k(1)); I$ i9 k7 n, V! v% t) l0 K
fprintf('\tk2 = %.11f\n',k(2))! t6 s" c) a/ r. O+ [+ y) F
fprintf('\tk3 = %.11f\n',k(3))2 i1 M* \/ S5 o% W' _6 E3 I: r$ v
fprintf('\tk4 = %.11f\n',k(4))
+ W# j, G* y* l, Vfprintf('\tk5 = %.11f\n',k(5))
2 E1 e1 ^$ Q g# t" jfprintf('\tk6 = %.11f\n',k(6)) e8 Y1 ~/ U9 X% [
fprintf('\tk7 = %.11f\n',k(7))+ ^$ ]% r: q3 B- Q0 i6 ~
fprintf('\tk8 = %.11f\n',k(8)) ^7 G7 N w* p4 z& [, q
fprintf('\tk9 = %.11f\n',k(9))
! z q$ Y0 ]& |1 zfprintf('\tk10 = %.11f\n',k(10))
$ R3 [8 Q, | X" X: S. Qfprintf(' The sum of the squares is: %.1e\n\n',resnorm); o5 I) G9 I# l- K! `( i) Y; G
k_fmls = k;
. s+ @0 f7 o7 R8 P8 I% Boutput; C4 y n# c3 U2 j6 u' [$ h
tspan = [0 15 30 45 60 90 120 180 240 300 360];+ q/ r6 g% k) K) t, n
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); 7 H6 A" k" q# N# U
figure;
8 r- |3 i& [: K( o( s$ ~plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')% Y/ H1 p8 D- p$ j
figure;plot(t,x(:,2:5));6 E e# i# R& | ^
p=x(:,1:5)
. O: Q- P$ _$ j4 A. P' [5 t, X7 m$ Lhold on
, {' F% a8 d% w: Pplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')+ R0 a/ t" p, i Y6 M8 Z
# ^( K( D) {) p# q1 I8 }5 g
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) X4 ^: X8 C5 L- }6 s% {0 ?0 c: vfunction f = ObjFunc7LNL(k,x0,yexp)' U8 e5 x% W- M" Y
tspan = [0 15 30 45 60 90 120 180 240 300 360];5 p. S( N1 v, K3 c' g
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
/ T' u2 y, j8 P! F4 c* vy(:,2) = x(:,1);
% W6 i1 n6 Y `, _y(:,3:6) = x(:,2:5);2 q, w" @+ k" T& V6 p$ p* z
f1 = y(:,2) - yexp(:,2);- |% k" g, B1 f# u
f2 = y(:,3) - yexp(:,3);
2 M$ ~" b; T8 E4 ]1 ~f3 = y(:,4) - yexp(:,4);
) Y! q. t, i! P) h# s! |# Hf4 = y(:,5) - yexp(:,5);% K6 m- q$ t/ U% q% s& s' Y
f5 = y(:,6) - yexp(:,6);
" d. x' r( M+ ~0 d$ nf = [f1; f2; f3; f4; f5];4 k' V$ U9 s; l9 }$ C" }9 s- p
) B& V) r4 L& ]- A9 B* B
. r9 X0 v% G) ?$ p; j. R
# b0 V/ D4 W1 {8 X3 Kfunction f = ObjFunc7Fmincon(k,x0,yexp)
( H" D; B' n$ G3 ^tspan = [0 15 30 45 60 90 120 180 240 300 360];
, K& _5 {5 I0 q/ k[t x] = ode45(@KineticEqs,tspan,x0,[],k);
, G U0 U2 e% R1 m4 fy(:,2) = x(:,1);
- j1 `' _' C, _, ~. ky(:,3:6) = x(:,2:5);
1 T. ~; b: v8 Z, {9 w- U: yf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
M" r2 q/ ~# p# V5 D( _9 Z3 S + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
! Q) x w$ ] O4 W; _, V" o + sum((y(:,6)-yexp(:,6)).^2) ;
7 B$ i) [8 i9 G9 a6 g, o& k: }! h) D. y' U5 R# d5 l i" G
* O$ I) p& t- f( o7 f* h( X$ @1 q0 S8 z. m3 _: k/ w& i
5 C0 T" _" j# U- E1 N. ?; X2 T* U
function dxdt = KineticEqs(t,x,k)
/ q$ C' X5 @" u: }* @& I# TdGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);2 j4 F f2 X1 ~2 O& V- H6 [
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
9 y1 J- m% A6 U* a: @! W$ v) D# ^2 DdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
: y1 S( ~( O( rdLadt = k(7)*x(5);$ f+ H0 y0 c$ D+ A* ?: v6 y% R( ] f
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);2 ^. R7 _ ~/ ]1 w: s
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];. @, b) Z' Z& h# i% _1 a/ ?1 N9 Z
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