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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit7 g, B f9 C! R
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4$ \; i! H9 w" z% A8 N/ v8 i
% k6->k6 k7->k7
1 `& o+ j% D- F' e% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);5 S/ d& w6 U* N2 `3 U
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
. l! `$ L, F5 e9 R9 [; ^% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
" k. [1 w0 h5 P: P: o- }) {: U4 E% dLadt = k(7)*C(Hmf);
3 D' a1 B8 U/ ]- Q" [! R L- ~' C%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);* G& F) Q) N: `0 h& u. i
clear all
6 c, l N. d7 a4 r) \7 h2 M* sclc2 v! |/ k ^ X, I+ ?- f1 N" i
format long; B6 a4 E: f5 V \0 q; O$ y: y0 y
% t/min Glc Fru Fa La HMF/ mol/L 9 e. z0 [& H8 R2 Y# {* q+ R* Q, {
Kinetics=[0 0.25 0 0 0 06 }) V4 _$ U1 H6 `! e/ q
15 0.2319 0.01257 0.0048 0 2.50E-04
' t0 g( y1 \0 \( | 30 0.19345 0.027 0.00868 0 7.00E-04. ~" I; o. n% {7 w
45 0.15105 0.06975 0.02473 0 0.0033
# y/ D8 T* `5 f- M$ \; ~& T2 Q 60 0.13763 0.07397 0.02615 0 0.00428
% b6 g4 i' W3 G 90 0.08115 0.07877 0.07485 0 0.01405
2 Z$ U4 u0 w5 u: H6 ~3 z. L" J( F! Y 120 0.0656 0.07397 0.07885 0.00573 0.021434 d. X& G0 v! D2 A+ m0 i0 F
180 0.04488 0.0682 0.07135 0.0091 0.03623
. W; f9 Q# G% `! M 240 0.03653 0.06488 0.08945 0.01828 0.05452
9 Y( z7 r4 U& _/ y 300 0.02738 0.05448 0.09098 0.0227 0.0597: _5 q& l' z1 K8 Q7 ^
360 0.01855 0.04125 0.09363 0.0239 0.06495];
3 j+ K: u2 u7 y( w; Ik0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
) r2 P; Q( }, J9 Mlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
, w; n% z; [* i7 |8 c# Iub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限/ Y* p! }- S# z! q" v- |
x0 = [0.25 0 0 0 0];
9 m6 c B8 G" _! Syexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]$ l4 I6 T2 g6 Q( p4 D7 \
% warning off0 |9 K6 N7 K- a4 j/ U; t
% 使用函数 ()进行参数估计8 L* t0 `2 q E6 D1 T; v2 J
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);' j; w; ~; S$ ?3 Q
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')1 {7 t9 Y- L! M( E9 }* e7 n! T: a
fprintf('\tk1 = %.11f\n',k(1))
! j% R1 A# T: Ufprintf('\tk2 = %.11f\n',k(2))) j% S3 A6 H4 s4 b$ }" a6 G
fprintf('\tk3 = %.11f\n',k(3)), I4 b6 T7 O6 U2 S5 c1 A
fprintf('\tk4 = %.11f\n',k(4))3 P. G M9 U5 U% Z0 o$ X. U
fprintf('\tk5 = %.11f\n',k(5))& f, |' D3 ~$ _# N# A7 w
fprintf('\tk6 = %.11f\n',k(6))
4 E# V' I2 S1 T1 a: ufprintf('\tk7 = %.11f\n',k(7))
2 V. B; S h8 F' u! J' {fprintf('\tk8 = %.11f\n',k(8))+ x4 S9 |" r( p9 k5 q
fprintf('\tk9 = %.11f\n',k(9))
$ h# s, j; X# N' o; efprintf('\tk10 = %.11f\n',k(10))+ |; v2 _" ?# Q# g
fprintf(' The sum of the squares is: %.1e\n\n',fval)
5 X8 }5 Z% J& W/ I/ hk_fm= k;
9 y# Y" R# i5 ^ L2 X% warning off
; k3 z" N. O; `. a+ F! R% 使用函数lsqnonlin()进行参数估计
( w; ?3 y2 A- Q( @; O[k,resnorm,residual,exitflag,output,lambda,jacobian] = ... x) j2 L' M& B/ A, `
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); . }4 g, N4 P% j9 U" I& B% b
ci = nlparci(k,residual,jacobian);# a/ Z: \! m% i* t8 t2 X% w
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')8 ^ @) l, S' J X9 X
fprintf('\tk1 = %.11f\n',k(1))( j4 C( E; |& z8 s: b9 u0 y
fprintf('\tk2 = %.11f\n',k(2))
5 S& z" n& w7 ofprintf('\tk3 = %.11f\n',k(3))8 i9 y: X! O1 h' }
fprintf('\tk4 = %.11f\n',k(4))
' b+ O, C6 N n. m, _fprintf('\tk5 = %.11f\n',k(5))+ g4 d' j3 p$ c. q6 _# ^
fprintf('\tk6 = %.11f\n',k(6))- X5 V& |5 ?2 v. K O# {
fprintf('\tk7 = %.11f\n',k(7))8 M3 p& p5 ?" m: O* s1 X- M5 [0 R
fprintf('\tk8 = %.11f\n',k(8))9 f2 k- p, |$ Q- W( Y Y+ R
fprintf('\tk9 = %.11f\n',k(9))' c) @0 Q5 X- u$ h+ c
fprintf('\tk10 = %.11f\n',k(10))
8 t/ y7 o2 M; C% K3 k9 U- |fprintf(' The sum of the squares is: %.1e\n\n',resnorm)5 @& z1 n) T- l8 I5 |) m
k_ls = k;- u+ H: `" i* @) V; Q
output
" U9 P2 p7 S% hwarning off
; K: U8 V$ o+ i/ f( v% q! F% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计7 O t* v/ H# N# y
k0 = k_fm;
: D* P2 h. d8 d }9 }9 P[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
! G9 w3 h. p$ |4 D lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
" w* B2 f. r4 y( ~8 G8 Z: Hci = nlparci(k,residual,jacobian);
; ` c) J) T2 p- A5 i: ?fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
$ ^' p0 A: y: ]/ ?, z) U+ gfprintf('\tk1 = %.11f\n',k(1))
3 z+ O& Q3 p& \ @9 Cfprintf('\tk2 = %.11f\n',k(2))0 P+ l6 h/ k4 E8 a: @/ W* V5 T, g2 F
fprintf('\tk3 = %.11f\n',k(3)): B1 T: _& Z4 R
fprintf('\tk4 = %.11f\n',k(4))
% @) h' k: @1 E( l3 |1 Ifprintf('\tk5 = %.11f\n',k(5))
2 d% Z L$ Z0 F4 r% g+ jfprintf('\tk6 = %.11f\n',k(6))
* X+ H# ~% v0 x2 b1 K4 H" ?0 \fprintf('\tk7 = %.11f\n',k(7))
. w* b- u0 ?( g+ S6 Xfprintf('\tk8 = %.11f\n',k(8))
K; E5 E+ p& T% ]5 a; gfprintf('\tk9 = %.11f\n',k(9))' I9 z8 t# e' Z* S" H
fprintf('\tk10 = %.11f\n',k(10))
" E: k6 G5 L9 Q( R. nfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
2 ^ g( w! ]8 \" D2 qk_fmls = k;
. V1 \/ p0 d4 {3 ?output
% J5 l( d' q5 s% rtspan = [0 15 30 45 60 90 120 180 240 300 360];- j4 s% H5 ]. v& W- y
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
- K& Z7 J& G+ f: ]figure;
8 ]. l$ I+ \9 I5 ]1 a2 w9 Fplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')/ A2 _( S f% A1 c
figure;plot(t,x(:,2:5));
" ~2 ~/ F$ r0 k1 \, C* Ap=x(:,1:5)
. U0 J: n$ w/ k( h9 Fhold on
; [0 G) @* Z9 X# y/ Y$ ?plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')1 Q* o( c& f! Y$ z4 e6 W
& m. V8 h. M: E( y U3 ?1 N6 x
- V# `; \" k6 b8 l
! Z- t) e) o s8 \6 Y8 a' R e" tfunction f = ObjFunc7LNL(k,x0,yexp)! |( e4 ?. p1 J1 {& }
tspan = [0 15 30 45 60 90 120 180 240 300 360];
/ b+ F* X% P" o1 t[t, x] = ode45(@KineticEqs,tspan,x0,[],k); # a3 X1 A* v3 F }3 Y. ]1 Y
y(:,2) = x(:,1);
$ y# @ i7 }( G* [. y0 ~2 a0 Y' J8 \y(:,3:6) = x(:,2:5);
* U6 x, k, i. i8 C7 }, j% T4 Vf1 = y(:,2) - yexp(:,2);
( ^0 ?! C6 ^6 X3 t- G) ]9 Af2 = y(:,3) - yexp(:,3);; o' q) m6 R& s) Y1 p
f3 = y(:,4) - yexp(:,4);
: w# r! B1 x' V0 u% L& D: sf4 = y(:,5) - yexp(:,5);( Z& }9 v, Y3 H1 G# U2 j: X( L2 J
f5 = y(:,6) - yexp(:,6);' I- d- ]0 Z" B( l+ _
f = [f1; f2; f3; f4; f5];
& ~ K1 q1 U7 H5 J6 R8 t+ L- G3 a- \4 o' |
5 @' ^: @# o- D; s! { U2 L6 z
! R# D- j8 s/ J; b2 `! zfunction f = ObjFunc7Fmincon(k,x0,yexp)
( T' p* y! h$ ]# q' ttspan = [0 15 30 45 60 90 120 180 240 300 360];- I; d6 l% P: p- v" {
[t x] = ode45(@KineticEqs,tspan,x0,[],k); 1 f1 T) x# @1 x$ k- \
y(:,2) = x(:,1);* Y7 U% D: E; \% C5 z! b# S; q
y(:,3:6) = x(:,2:5);
* Y! i* f) z7 a6 cf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
5 U) e' q8 `' U' y8 U + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ... g3 c2 [! e) }
+ sum((y(:,6)-yexp(:,6)).^2) ;9 Q1 t+ E% x) I1 g: }5 [7 Z% a
, `& h0 `& a5 w& O# X
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" t9 M( D l( Y$ `
function dxdt = KineticEqs(t,x,k)
* q+ i& @7 X- k" {dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);( Q b: R4 T3 T/ F' g0 B `, ~0 I
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);$ Q8 N# k8 }" Y$ V
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
5 ~/ ?, {0 m9 {' E) Y: bdLadt = k(7)*x(5);7 j+ e+ E; w1 t5 R( O
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);! j+ t8 n7 @% i; e* S
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
U, W, x9 {0 f/ h
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1 L* }1 u: N- p B" q$ u |
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