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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit( A8 E% p( P6 g7 Z9 i) Y
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4
* D# E. T, s1 P1 t0 U5 y% k6->k6 k7->k7
7 }, u+ d J+ y/ M$ P- G. ?: t2 I% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
) }# ^) c \% r% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);! e! C. K7 W$ k+ r
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
' y! c, p, p" I8 T# @+ y# C7 |" i% dLadt = k(7)*C(Hmf);( {9 y* J% I" A+ [. v
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);; L( ?6 ^7 L: @6 H; j- v( f# u
clear all" o2 M! e4 I3 i+ B1 {( q
clc1 a5 t0 n, }; s2 |) H1 P
format long
2 i* G7 I) A# G/ i% T% t/min Glc Fru Fa La HMF/ mol/L % v/ o( x) m' {: n5 s
Kinetics=[0 0.25 0 0 0 0
) M8 j. F* n* W$ M0 o2 |; R 15 0.2319 0.01257 0.0048 0 2.50E-04
* C" o- f, }% ^5 `) t7 U7 [ 30 0.19345 0.027 0.00868 0 7.00E-04
& I/ ~: g0 }/ k4 k 45 0.15105 0.06975 0.02473 0 0.0033
8 L3 t A( J1 D2 D O8 M 60 0.13763 0.07397 0.02615 0 0.00428
$ S7 x2 o5 _5 }1 u1 M* t9 j9 } 90 0.08115 0.07877 0.07485 0 0.01405
- a" b7 D2 @8 y, p4 d 120 0.0656 0.07397 0.07885 0.00573 0.02143
. j( m6 ^5 I# b. o: h: D 180 0.04488 0.0682 0.07135 0.0091 0.03623; q3 D/ f' i& f" o
240 0.03653 0.06488 0.08945 0.01828 0.05452
3 e# U/ o9 n- e8 D 300 0.02738 0.05448 0.09098 0.0227 0.0597
. d, W& R! u+ e+ c2 @ 360 0.01855 0.04125 0.09363 0.0239 0.06495];2 l% R& S0 D% f' x; {- Q
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
$ [" o* g6 ?2 F: `/ Z) `; wlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限2 ?. ~% j3 i7 Z" U' o3 G
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
+ I5 F/ o" L- @, Rx0 = [0.25 0 0 0 0];# y q7 N& q r5 q9 H0 i/ v$ {
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
( s y( x+ d2 |. c* W2 @% warning off
2 T( g! S. ^* G5 P- ~% 使用函数 ()进行参数估计" d2 g! F# |4 v, ]5 e
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
) W* y4 Y7 W* T5 lfprintf('\n使用函数fmincon()估计得到的参数值为:\n')
2 S/ m/ P/ Z. _& s& Vfprintf('\tk1 = %.11f\n',k(1))9 L. @( z# z! d
fprintf('\tk2 = %.11f\n',k(2))
+ q9 W! B# e# \fprintf('\tk3 = %.11f\n',k(3))
! U8 |8 B, C0 H; W3 @7 hfprintf('\tk4 = %.11f\n',k(4))
/ f6 @! f7 N- r5 Y6 U6 xfprintf('\tk5 = %.11f\n',k(5))
' X( u/ c( J9 m) z: P5 Mfprintf('\tk6 = %.11f\n',k(6))! |, D& L# O% ~, \
fprintf('\tk7 = %.11f\n',k(7))( Y8 X8 x- @/ N h9 ~
fprintf('\tk8 = %.11f\n',k(8))
' S. r& [. T8 @( Q9 Mfprintf('\tk9 = %.11f\n',k(9))3 O0 q. J y8 U h' @% L
fprintf('\tk10 = %.11f\n',k(10))+ I: y0 ]8 ^. p I- a9 n5 b
fprintf(' The sum of the squares is: %.1e\n\n',fval)9 s8 a3 E) q4 X- |2 X9 s+ r, e$ C
k_fm= k;. Z9 y5 m6 u0 L& K% F
% warning off, H( k3 h ~8 a o9 _4 \9 G
% 使用函数lsqnonlin()进行参数估计0 T# i" T( C4 I9 q9 N# u
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
/ J3 ]+ C; f8 O( R1 \) [0 Z+ l! s5 M% q lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
7 H, D2 H" S4 e, A: H+ Bci = nlparci(k,residual,jacobian);* H. s; p! [! f$ o. P- P! a
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')6 u6 _1 ?* t2 v* z5 h
fprintf('\tk1 = %.11f\n',k(1))
" Y& P1 ]! \5 ]8 t: Q* d+ j6 Afprintf('\tk2 = %.11f\n',k(2))
O# u$ R- d3 W7 E3 @fprintf('\tk3 = %.11f\n',k(3))9 N+ g3 J* f8 g0 c+ l
fprintf('\tk4 = %.11f\n',k(4))
9 R9 J( b! H9 s& ^$ b f: ?fprintf('\tk5 = %.11f\n',k(5))' {1 x% j. ~+ o) T ^
fprintf('\tk6 = %.11f\n',k(6))
0 H6 N5 ]. u& yfprintf('\tk7 = %.11f\n',k(7))
# x5 H& O" Q( _& g; i& K- Mfprintf('\tk8 = %.11f\n',k(8)). d& p2 f( t) T/ x1 J# C- z
fprintf('\tk9 = %.11f\n',k(9))7 ~8 ^2 y* o. u# S- y5 u' R5 x6 \* z
fprintf('\tk10 = %.11f\n',k(10))
( Y1 N5 W U7 A5 a1 Y4 Qfprintf(' The sum of the squares is: %.1e\n\n',resnorm)! [( O7 S3 A# l9 ]1 a7 z* r8 s
k_ls = k;7 j" k, ^: V4 _
output/ ^; x( m$ Z u' T" s1 h; l2 J; h$ j, ~
warning off/ s9 d# z$ A k I- @8 |0 m
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计% k! ?* z1 [( \- z( y6 j' {& P+ i
k0 = k_fm;
; U0 m. M6 X1 _" m' L[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...7 p2 h% L. D, W# {/ d% ]
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); * d/ {. t- ?, p: C. Q( I
ci = nlparci(k,residual,jacobian);& b0 L- W: i5 |6 r
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
8 L% [6 |# r; [fprintf('\tk1 = %.11f\n',k(1))
- c2 ^3 z% j4 j! T9 \) }7 tfprintf('\tk2 = %.11f\n',k(2))% e* k7 Z7 o1 B' n0 X) Y$ D0 k
fprintf('\tk3 = %.11f\n',k(3)); }, k# G3 z1 _: ~& e/ E3 x6 U
fprintf('\tk4 = %.11f\n',k(4))
3 `9 y' _# t; L- a3 kfprintf('\tk5 = %.11f\n',k(5))
* X5 e, i, z" N$ i% M- @8 p; efprintf('\tk6 = %.11f\n',k(6))
) q6 k6 H: q& \fprintf('\tk7 = %.11f\n',k(7))
4 A" B- a0 x9 x# J/ L8 p& Ifprintf('\tk8 = %.11f\n',k(8))
2 S7 p* J! t) y4 I, |% O1 e+ `fprintf('\tk9 = %.11f\n',k(9))
5 t2 z9 m2 s1 B8 @$ D0 @3 G$ Q8 Pfprintf('\tk10 = %.11f\n',k(10))5 G7 c( m& a* u/ F! W
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
0 T# d- c. N( D3 W8 c. Nk_fmls = k;
' G0 z7 z6 l' Woutput
/ f* J5 u; F. Q0 J) Xtspan = [0 15 30 45 60 90 120 180 240 300 360];4 ~4 O- [$ G' g8 Q' t5 @) e
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
1 p6 j4 S* _' A# W" H, C. Tfigure;
' K8 G- D7 e7 N- N8 \! Iplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
) f: o0 s: {8 S( ~; ~% m4 D, `0 Sfigure;plot(t,x(:,2:5));
& U/ e u: Z' e Ep=x(:,1:5)
6 Y' `0 o$ y3 v- _1 Shold on
0 e F" }' g& |& Dplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
# {8 ~8 E2 \6 T. g. q# P0 J: l3 g6 L+ T6 F8 c* D
& |# W6 z' e2 U" l
3 H7 \. y: I* sfunction f = ObjFunc7LNL(k,x0,yexp)8 P! r8 C1 d8 w! G$ M6 e; s1 _: d S
tspan = [0 15 30 45 60 90 120 180 240 300 360];4 w, w; [# h+ N+ d
[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
3 i, d- @0 W1 l+ {y(:,2) = x(:,1);
7 c) |+ N6 c, ]# c7 Ly(:,3:6) = x(:,2:5);
! I! B9 D! t! r5 j6 v1 B/ P# I& Of1 = y(:,2) - yexp(:,2);" \! ^ e: a9 s8 k9 g! \% n/ I
f2 = y(:,3) - yexp(:,3);
% ]# u* R( \) x" `; bf3 = y(:,4) - yexp(:,4);; {) T4 ^" S1 J2 ~: y
f4 = y(:,5) - yexp(:,5);
& s: b5 P* N; `/ Q$ `6 af5 = y(:,6) - yexp(:,6);8 F8 m, [0 y; i8 L! G
f = [f1; f2; f3; f4; f5];
/ D" D: ?& t' d6 ^) g6 j# m9 \ W; x4 E: t3 k( m! n
5 |3 X5 A, V0 U9 z- t! P* x7 N- i; j% [5 r6 i
function f = ObjFunc7Fmincon(k,x0,yexp)
! \1 l& F- ?3 N5 F* B; v5 Ntspan = [0 15 30 45 60 90 120 180 240 300 360];6 X* J/ V6 p' z5 A+ ?
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
) f5 I) e% b/ l+ x4 Y, w) iy(:,2) = x(:,1);
4 f$ O. a' }- P) c2 l6 O2 Ty(:,3:6) = x(:,2:5);+ ?& O& C8 P5 G2 F4 l
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
/ I- P- m/ j5 D6 j* ` + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...; w; k9 j' T* J! \* G; H3 ~$ c& i
+ sum((y(:,6)-yexp(:,6)).^2) ;' i, Y( k6 H5 _. a# r9 N+ i
) r5 a, u P( V2 q: [ i* r
1 z' `0 i& ?3 v& E3 b% d# i: f4 q+ d, e5 c
& Z7 z. W/ `4 w r
function dxdt = KineticEqs(t,x,k)' x- n4 a- r; |, M2 ~8 R. J# f
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);# G' V2 `! D* j- q x
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);: [; m. L4 h6 X2 r' C6 c
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);$ H, T2 A0 m0 Z7 Z. }. x; \
dLadt = k(7)*x(5);; S' Y7 w2 d2 [% z* e3 P) s
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
" b: _5 u0 y+ M9 f) l* d- ?dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
* p& `# ^, }) ~ Z3 b' \8 x
2 u) R- N: U( R* ?0 S# [2 W8 h, l, U! {* ]% C
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