- 在线时间
- 22 小时
- 最后登录
- 2016-10-27
- 注册时间
- 2014-1-1
- 听众数
- 9
- 收听数
- 0
- 能力
- 0 分
- 体力
- 152 点
- 威望
- 0 点
- 阅读权限
- 20
- 积分
- 88
- 相册
- 0
- 日志
- 0
- 记录
- 0
- 帖子
- 88
- 主题
- 5
- 精华
- 0
- 分享
- 0
- 好友
- 9
升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
|---|
签到天数: 24 天 [LV.4]偶尔看看III
 |
10体力
function parafit) w0 Q; i( m9 Z- k7 ^" ^ O4 [
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4
% P0 \7 g3 ?: L% k6->k6 k7->k7/ z+ K' \9 w( L
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
/ z L) S- j: m% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
) W* h; K( T5 v5 g0 H# ?% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);# a: B/ K6 `, ?& Y: x) K6 G1 t: ?
% dLadt = k(7)*C(Hmf);
0 E: X+ \; e6 g6 f8 o4 w1 }' N* Y%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);, M( t% w. V0 q* F. O! C7 m6 R
clear all/ B* C) M T" E) g" r- z5 q& l
clc6 P, t0 t: ` a% u( b
format long
7 @6 z! y; D2 l( X: o+ S7 V- C, g% t/min Glc Fru Fa La HMF/ mol/L - C$ g2 d4 t3 d6 D9 [
Kinetics=[0 0.25 0 0 0 0
: o, t& }1 g5 L. R; Y 15 0.2319 0.01257 0.0048 0 2.50E-04 [% l4 n( N5 [& B& ^5 ~
30 0.19345 0.027 0.00868 0 7.00E-04
. ]% M3 }' Q3 n- g2 j1 ~* ^9 z 45 0.15105 0.06975 0.02473 0 0.0033- z% G; U. e# C! V: D% g
60 0.13763 0.07397 0.02615 0 0.00428
9 O. q: i# k6 C4 E, X c 90 0.08115 0.07877 0.07485 0 0.01405
& `2 u& }: k0 S8 h. ]9 y, ], X; j3 w 120 0.0656 0.07397 0.07885 0.00573 0.02143
0 V1 A* N- E, F 180 0.04488 0.0682 0.07135 0.0091 0.03623& V" a4 u. j- q3 D) J4 m
240 0.03653 0.06488 0.08945 0.01828 0.05452# s5 H$ `) H' M6 b" A
300 0.02738 0.05448 0.09098 0.0227 0.05975 b# W# O1 S; h! }8 e8 l: w/ O
360 0.01855 0.04125 0.09363 0.0239 0.06495];
6 U9 H/ W: a5 V$ P3 x0 B6 ?k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
$ Q! P" [2 A2 B* x. h! Tlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
% F8 r# x4 r0 H, L7 z5 H4 cub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
! O# W" W8 g3 ^. Ix0 = [0.25 0 0 0 0];4 g4 ?( D5 F! c. b Z( b
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]- Q5 |% @' O5 y% ]! q/ d
% warning off" x; s0 Q# |0 ]4 k
% 使用函数 ()进行参数估计/ u0 m4 k+ A' w9 m" u
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp); \4 X. d6 P, }; @% n4 H8 {, H) ]0 v
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')1 d, D" }6 v' I6 a8 t( i" P
fprintf('\tk1 = %.11f\n',k(1))
8 c1 X8 Z9 o( w1 _0 ~fprintf('\tk2 = %.11f\n',k(2))
t! p0 K, P" y. }, l& tfprintf('\tk3 = %.11f\n',k(3))9 S }8 O8 A: k0 R- y- n) w1 N
fprintf('\tk4 = %.11f\n',k(4))
* W3 H9 h6 p; Z; Dfprintf('\tk5 = %.11f\n',k(5))( y0 E/ O: q7 S+ p4 L
fprintf('\tk6 = %.11f\n',k(6))
7 j, p4 [# {! L! J3 Ufprintf('\tk7 = %.11f\n',k(7))
4 F1 ^- ?3 `9 ?# W. ^ O+ R( T7 zfprintf('\tk8 = %.11f\n',k(8)); x m& W! Y0 e3 S; x
fprintf('\tk9 = %.11f\n',k(9))* E: n# i4 i* j0 @; k! B' t7 L# ^3 n, z
fprintf('\tk10 = %.11f\n',k(10))
5 w; ?/ d" e) [% Z6 W$ s9 Mfprintf(' The sum of the squares is: %.1e\n\n',fval)
2 v9 u9 x, N( u6 ?$ O% g" `k_fm= k;: j1 ^' m/ c$ g9 [4 ~* U
% warning off
. \" {' a8 s, [& e; B, ~% t% 使用函数lsqnonlin()进行参数估计
+ m0 s t3 M0 ?0 M T- M; F) S[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
: z& i7 D& T; o; i$ `4 b lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); g" g: l: t9 @4 H* e# q0 Q
ci = nlparci(k,residual,jacobian);1 G7 L$ ` l) n% l7 }- Z5 C
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')5 k& I" t" `4 x7 r
fprintf('\tk1 = %.11f\n',k(1))0 w9 G$ q, w' O' M% h
fprintf('\tk2 = %.11f\n',k(2))
1 B" X) G0 {$ p2 f4 _fprintf('\tk3 = %.11f\n',k(3))
: N+ A. ~" U, G" ?* _) W1 I5 r% Zfprintf('\tk4 = %.11f\n',k(4))) Q) |( r: z- I# w `3 h0 Z+ }
fprintf('\tk5 = %.11f\n',k(5))
- ]0 n& g( k+ sfprintf('\tk6 = %.11f\n',k(6))
* f/ d# @/ n! o8 gfprintf('\tk7 = %.11f\n',k(7))4 y3 A* j' u4 B5 i1 Z/ v
fprintf('\tk8 = %.11f\n',k(8))
; z0 e3 K1 n6 V% x/ Cfprintf('\tk9 = %.11f\n',k(9))
! W% ~! t3 B9 @7 ?' I- a' Kfprintf('\tk10 = %.11f\n',k(10))
9 a% h0 q( t f. g- N3 Gfprintf(' The sum of the squares is: %.1e\n\n',resnorm). \' r& o+ {" u9 v# c
k_ls = k;$ S9 {3 m2 [& I6 e0 k7 g/ k) q6 e3 i8 O
output
* o& p4 e4 Z( C' O* q. \6 Xwarning off R i; y0 ]5 r6 U/ x( @7 ~1 B8 \' G
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计) A5 ~# h0 w5 ]5 ]
k0 = k_fm;% [( a3 X, H. I2 M A9 V
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
$ m" ^. `& }# s! Z lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
" O3 l( @2 u% Mci = nlparci(k,residual,jacobian);
1 x: U" `# Z2 H2 S, ofprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
* `! L! l1 D; J4 X' d7 Z8 |* O; G8 |fprintf('\tk1 = %.11f\n',k(1)) i8 u. Q# e- I
fprintf('\tk2 = %.11f\n',k(2))
7 N+ M2 ~2 w1 C4 A7 c- sfprintf('\tk3 = %.11f\n',k(3))7 D' G s* U* u% C2 J8 N3 B6 n
fprintf('\tk4 = %.11f\n',k(4))
( y" d% r% E- p' P+ n7 Sfprintf('\tk5 = %.11f\n',k(5))
: m: F# d4 J a; ]2 Mfprintf('\tk6 = %.11f\n',k(6))
/ ?/ f, P- F' D, |fprintf('\tk7 = %.11f\n',k(7))3 c9 l1 R% I$ k: w
fprintf('\tk8 = %.11f\n',k(8))4 e5 [1 j8 b% ^4 q
fprintf('\tk9 = %.11f\n',k(9)) F$ M3 _2 k6 E- G# j m
fprintf('\tk10 = %.11f\n',k(10))" d$ c' b3 `3 P$ R8 B. N" U
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
* h7 ~! Z. g% U" f+ pk_fmls = k;
0 w* I1 i' W6 V# routput0 p8 V! }. }! e) n
tspan = [0 15 30 45 60 90 120 180 240 300 360];" o+ |& E5 e" p
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); " D- i& E5 \2 x+ d) v2 k
figure;
: W( ~' X4 F* P9 X5 a ~, Hplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
& z( m0 Q1 |+ `figure;plot(t,x(:,2:5));( @* e# }8 P# }0 T1 ^+ e3 d" }$ J
p=x(:,1:5)! y5 Q/ d6 |. H' A% `+ ] L
hold on
2 Z+ Y& e( Z; T8 }) xplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')2 |( t! F; _ D+ K) }6 m1 @" D
) a4 \- Z- `' u* O' w* ~
]5 P3 D! `0 T4 M
! u4 o7 ~2 }: `+ Wfunction f = ObjFunc7LNL(k,x0,yexp)
+ D. f# }% q: Ctspan = [0 15 30 45 60 90 120 180 240 300 360];
& V+ [4 O7 y6 T5 e1 O! o[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
4 W9 y0 l, Z7 |/ q1 K- ^y(:,2) = x(:,1);+ Y. z& X2 Z7 {6 |( w
y(:,3:6) = x(:,2:5);; u. |8 D! u9 f. q2 E8 O5 x" u
f1 = y(:,2) - yexp(:,2);0 m v' d6 v0 U
f2 = y(:,3) - yexp(:,3);
( M, M3 z8 X6 s3 c) p, Q1 lf3 = y(:,4) - yexp(:,4);8 P/ V" i" ~* M7 c/ P$ O# r
f4 = y(:,5) - yexp(:,5);
3 m/ q7 m' I" i$ }! t+ B7 o. af5 = y(:,6) - yexp(:,6);
& L4 v G/ |) ]9 G3 p1 O% k. C& |+ \f = [f1; f2; f3; f4; f5];
9 c% H! h( S' h: o' R
/ D$ b- L, B* K U s" f4 l1 `# `
" o" b0 Y# ? e( i1 | v) ]6 M5 x7 W6 e. a( V: T( f$ W' ~' S# b
function f = ObjFunc7Fmincon(k,x0,yexp)
' C. `: ~% D( r+ c9 o, p4 \tspan = [0 15 30 45 60 90 120 180 240 300 360];
8 p' }$ g- M% T2 O% E; y[t x] = ode45(@KineticEqs,tspan,x0,[],k); ) l+ f- u. l( t( s$ l( E. }. `
y(:,2) = x(:,1);7 Z9 F. c3 z5 c& Z
y(:,3:6) = x(:,2:5);
9 T- W- T. w# j7 E* _- `- [, W* Wf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...* ~' m B& ~+ X, B! ^8 u
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
0 m3 x" V( c' O7 y8 u + sum((y(:,6)-yexp(:,6)).^2) ;/ q( Z' A) S6 ]5 u
7 O' W( l& M8 ~8 v
# F, z$ \; @# A; t; w! `9 r' O6 T6 p4 c# U" n
4 H. ?$ D* _" q) G1 Z% Ifunction dxdt = KineticEqs(t,x,k): f" ]( U7 O2 P5 H. o! W/ ]: }
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);& y% e; Z4 P! w, R
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
9 O' w7 P% E1 @' a tdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);: Y' v+ G% T3 M1 ?5 X2 k
dLadt = k(7)*x(5);
1 r5 b: Z5 I) N% F! v! e$ [dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);7 e2 L! b0 w. R p
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];3 b3 Y- m, c( d8 g2 |0 k
9 m# p7 v8 q$ f2 N
7 H- t, v; r4 z! {) V( N |
-
-
Glc.zip
2.33 KB, 下载次数: 0, 下载积分: 体力 -2 点
M文件以及数据
zan
|