- 在线时间
- 22 小时
- 最后登录
- 2016-10-27
- 注册时间
- 2014-1-1
- 听众数
- 9
- 收听数
- 0
- 能力
- 0 分
- 体力
- 152 点
- 威望
- 0 点
- 阅读权限
- 20
- 积分
- 88
- 相册
- 0
- 日志
- 0
- 记录
- 0
- 帖子
- 88
- 主题
- 5
- 精华
- 0
- 分享
- 0
- 好友
- 9
升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
---|
签到天数: 24 天 [LV.4]偶尔看看III
 |
10体力
function parafit
+ o8 u7 K+ D! L4 z2 T. Y8 g% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k44 a# o* x/ E& }
% k6->k6 k7->k7) n2 D( z; e' y
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);8 n/ Z7 h! @0 ^& I
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);' u7 P% G3 v/ b% ^0 g, M% Z" o
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
5 Z" L' N$ }3 Q2 C: g T% dLadt = k(7)*C(Hmf);
2 K3 l; f( I2 G) M. z%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
Q5 p# f( A+ \$ K' bclear all& Z2 j( Z# A4 i; T9 }4 C1 A! s7 K
clc
1 ]+ q3 A1 {0 B$ y* [format long
5 b8 s, T1 `4 q% t/min Glc Fru Fa La HMF/ mol/L
) \& u# Q4 @) P {5 S% S; H, o* t Kinetics=[0 0.25 0 0 0 03 X# V+ ?4 i' D6 M% J
15 0.2319 0.01257 0.0048 0 2.50E-046 v" T1 d2 C3 L, P" l
30 0.19345 0.027 0.00868 0 7.00E-04
2 s Q( w9 l8 _2 `8 W 45 0.15105 0.06975 0.02473 0 0.0033
! w( s& X; W+ [: ~5 C) A 60 0.13763 0.07397 0.02615 0 0.00428, V# z; R7 y. o% Q9 Q; v+ Y) n# x7 M
90 0.08115 0.07877 0.07485 0 0.01405
) E1 l& V' ? R7 m 120 0.0656 0.07397 0.07885 0.00573 0.021435 f* b9 M6 D5 S; M' @
180 0.04488 0.0682 0.07135 0.0091 0.03623" H9 R: f3 V; y2 U" }% e4 i8 L. [
240 0.03653 0.06488 0.08945 0.01828 0.05452
% w8 }0 x6 [2 s2 i" n4 U 300 0.02738 0.05448 0.09098 0.0227 0.0597; p" b {% {8 m/ p8 n' p. }
360 0.01855 0.04125 0.09363 0.0239 0.06495];
! t+ [+ `' n, T( [k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值( T( t5 Z$ W$ W" I" L1 Z J) ?
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
& q# M2 h6 Z: T! J% |ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限( v! Y2 O8 I9 Z1 C& D
x0 = [0.25 0 0 0 0];. }/ x- A" `. i& d2 `
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]* w5 ^, Y7 U7 s8 O9 p6 i
% warning off7 J1 E2 P' m; l# P9 k% t( }
% 使用函数 ()进行参数估计
2 v; i$ S- T3 Z5 B[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
& b" H8 ^) f2 O. B9 s" Ufprintf('\n使用函数fmincon()估计得到的参数值为:\n')
! P9 u2 t1 w' f4 hfprintf('\tk1 = %.11f\n',k(1))( a$ F' Y' `8 j
fprintf('\tk2 = %.11f\n',k(2))" ~% @4 W/ d8 A7 K5 ~' y
fprintf('\tk3 = %.11f\n',k(3))- w' t) G+ [0 P Z3 `2 M
fprintf('\tk4 = %.11f\n',k(4))
6 E5 U5 }. N/ s, r8 Y/ Ffprintf('\tk5 = %.11f\n',k(5))+ y ]/ z) _/ M$ W D
fprintf('\tk6 = %.11f\n',k(6))( ]9 r3 i, f" f N
fprintf('\tk7 = %.11f\n',k(7))
' \) p# t, Q% N1 u$ k4 K8 G! Kfprintf('\tk8 = %.11f\n',k(8))
+ J9 y3 o: T) _: k9 \! r9 }; Cfprintf('\tk9 = %.11f\n',k(9))
/ V5 a; Y6 `" V3 p+ q7 u8 kfprintf('\tk10 = %.11f\n',k(10))
' S P- N1 c7 \) L5 _3 S, T' rfprintf(' The sum of the squares is: %.1e\n\n',fval)
( D6 e$ j8 B5 M1 Q8 \k_fm= k;0 {1 K* }- d1 P/ V# T4 t
% warning off( y( E$ t9 u2 h
% 使用函数lsqnonlin()进行参数估计
) E" L: O) p- I8 v9 ][k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
/ ^+ Z- z7 Q* Q8 `, u1 W4 [ lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); q" i4 Z5 D. n! d0 @
ci = nlparci(k,residual,jacobian);
) V+ k6 U7 ?( T0 c- nfprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
V' A) y, p. k! S3 h; q1 C5 r4 c* bfprintf('\tk1 = %.11f\n',k(1))
4 B$ L5 z6 k# k; J, A- Hfprintf('\tk2 = %.11f\n',k(2))" \1 e- V, D1 j- d1 p
fprintf('\tk3 = %.11f\n',k(3))
2 i$ x+ u- x$ P! K; L1 N$ h2 Dfprintf('\tk4 = %.11f\n',k(4))
8 o* v _; q. d7 c$ \fprintf('\tk5 = %.11f\n',k(5))
" {+ O+ m& c* hfprintf('\tk6 = %.11f\n',k(6)): y4 F% `. B0 n9 x. i$ T
fprintf('\tk7 = %.11f\n',k(7))
8 |' v1 I' h1 i2 K3 q; ?; U* Yfprintf('\tk8 = %.11f\n',k(8))& N, [* R$ f+ k- P+ `3 }* _$ N
fprintf('\tk9 = %.11f\n',k(9))- }4 m' t- v# {+ `& H' l
fprintf('\tk10 = %.11f\n',k(10))
! ?! u) w( e8 \, N9 N% Gfprintf(' The sum of the squares is: %.1e\n\n',resnorm) r+ J2 e, o% p9 U- _) f
k_ls = k;
' C5 o8 \) S% j; b# foutput' h( V1 g; ~; U: e$ S! S b7 V3 A
warning off5 G: C7 ?! {" E' w& A+ O
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计4 s, o c/ r! Y$ D* v4 i+ W1 K
k0 = k_fm;
/ X$ t3 \8 y2 p* k5 u( v[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
$ e; l6 q/ p) s% j3 }' Z lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
0 T6 r8 L# L6 m# x8 t/ d+ Q" i5 f, Tci = nlparci(k,residual,jacobian);5 C+ G/ U6 G; f. M. C
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
5 z: g1 V6 V u6 W @. Vfprintf('\tk1 = %.11f\n',k(1))0 u5 J1 w& P0 \9 Q; `* n$ I
fprintf('\tk2 = %.11f\n',k(2))& N! g, i5 d% B1 `, O& }: q" \3 s
fprintf('\tk3 = %.11f\n',k(3)): s. V I5 X2 R% _/ O( K0 i
fprintf('\tk4 = %.11f\n',k(4))
. J- V4 v6 Z% A$ Q Yfprintf('\tk5 = %.11f\n',k(5))
3 i4 |" L: g, ~" X1 o; w& r+ x- _fprintf('\tk6 = %.11f\n',k(6))9 Q' q3 u# B7 N' h; I( O$ k' t' X9 A
fprintf('\tk7 = %.11f\n',k(7))
" Y1 p/ G& a7 T5 z& k" yfprintf('\tk8 = %.11f\n',k(8))
/ Q% K4 ]+ A1 F' Y/ o6 g& Ufprintf('\tk9 = %.11f\n',k(9))" P3 `' P6 O8 G1 f; \- B5 y `9 Q/ P
fprintf('\tk10 = %.11f\n',k(10))( ?1 D5 a8 u. e" ]; v
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
& }( D3 i+ F; N) Q- o0 Hk_fmls = k;* G" c1 b" z" C+ d0 Q% ]) y
output% n4 V2 o9 J0 D6 H( F9 X
tspan = [0 15 30 45 60 90 120 180 240 300 360];( G. K c* Z% s3 @' c: f
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); 0 F: B V2 Z7 P3 n: U9 w& L& H
figure;$ C" Q0 R3 x; U P/ n0 J9 ^
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
; h5 |0 p+ Y8 e) } w' Wfigure;plot(t,x(:,2:5));
: ]5 T/ Z, q- D6 x% ap=x(:,1:5): {7 `" p" c: `& K- A
hold on
" s$ B. C0 X7 Q0 oplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')" O! G; J% R+ I0 Y$ r+ U: ?1 f
! x$ m/ ~! \9 D/ L
4 N% v% b- {. M1 j2 x( G1 t' p8 J
) ^/ ~5 p x- v, p0 d, R+ mfunction f = ObjFunc7LNL(k,x0,yexp)4 D' z V7 ?& P( G
tspan = [0 15 30 45 60 90 120 180 240 300 360];- \5 M6 J3 ?% }, H8 i
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); 8 f7 Y& W$ u7 e* J+ d
y(:,2) = x(:,1);
( n$ E; Z- ?- ky(:,3:6) = x(:,2:5);
, y) {6 q* k u+ O8 Of1 = y(:,2) - yexp(:,2);
+ o# F2 V0 \7 f+ Cf2 = y(:,3) - yexp(:,3);
6 `+ u7 w" C. ^+ V$ df3 = y(:,4) - yexp(:,4);
% t R/ J; ?. B8 k. v' v4 Tf4 = y(:,5) - yexp(:,5);
7 e) I, x/ _- l; C5 m! af5 = y(:,6) - yexp(:,6);$ U( O4 G! L( [) ]0 `5 ~
f = [f1; f2; f3; f4; f5];
& M: y. i) a. u2 S+ r" K# ^' T7 r0 \# d! T7 D; \# v; o- X
) [9 M2 [: Z, x1 f
& g- k3 C3 h: Afunction f = ObjFunc7Fmincon(k,x0,yexp)
. f6 g: U" c) J' _$ B3 Xtspan = [0 15 30 45 60 90 120 180 240 300 360]; [* O: Q/ b8 D/ J3 Y
[t x] = ode45(@KineticEqs,tspan,x0,[],k); : o6 H- X9 O% O' n+ S3 @7 t) V1 l
y(:,2) = x(:,1);
1 n' _! N% I" V2 p: f. `$ ey(:,3:6) = x(:,2:5);. K& d4 V9 p s. `2 S; X( [
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ..." {0 M$ Z4 A% J2 P8 J
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...' y. g1 {0 X% A+ a
+ sum((y(:,6)-yexp(:,6)).^2) ;5 s! f' H% W# G; d I# ]. N
1 U4 m9 n* h2 E
/ y) q3 y5 [3 g$ b, M z- u" x; R5 X! R6 z( o7 R# _1 y0 f
4 i% A8 X5 F# f, H' r# V8 _6 Xfunction dxdt = KineticEqs(t,x,k)% k- ]5 V$ S) u4 N [( L6 N
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);9 v3 ~% X, O# y# q: u9 z
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);. |, E2 B+ j4 o/ _; u8 y% H. Y$ f
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);% y% ]' u: q0 c) S
dLadt = k(7)*x(5);! N9 p+ e7 i5 y: ], |8 p, h. ^6 F
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);1 d* `) v; i0 Q; r$ c
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
! @( m4 M0 H, p( R0 l: ^2 ]9 @- S7 \
5 p- N& E1 \. u4 m
|
-
-
Glc.zip
2.33 KB, 下载次数: 0, 下载积分: 体力 -2 点
M文件以及数据
zan
|