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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
& v" k5 [3 `$ s; t4 C% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k49 x# r4 ] U/ v( `' ?. A2 X! S
% k6->k6 k7->k7
/ P% M: s1 w {% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);* Z2 j: A+ ~) K" C, W" s
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);% B* J# S5 `2 K$ R; n$ X# I
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
8 w: M0 {/ k2 e" z; g% dLadt = k(7)*C(Hmf);$ K' P: p# _# J1 `. F2 x6 }& z
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);2 U: W& c& F0 T) b1 ~" O8 M5 R
clear all2 ?0 r2 g7 M1 v4 l7 z
clc8 f& L3 v8 q* V( W1 ?8 y
format long" \. e$ _# ]' w$ _
% t/min Glc Fru Fa La HMF/ mol/L
0 W3 d, f3 ^4 @( j" k) G5 l; A Kinetics=[0 0.25 0 0 0 06 u8 b+ ^! j+ A y4 y6 q0 |8 x
15 0.2319 0.01257 0.0048 0 2.50E-04 v2 ]) l" C, e1 d
30 0.19345 0.027 0.00868 0 7.00E-041 P0 u& \8 s5 V* _& _
45 0.15105 0.06975 0.02473 0 0.0033
+ b7 R. X, E/ |; }+ X# x 60 0.13763 0.07397 0.02615 0 0.00428$ S! j E4 t; V- m
90 0.08115 0.07877 0.07485 0 0.01405
: s0 f) ^. O. i y 120 0.0656 0.07397 0.07885 0.00573 0.02143
" I }5 V/ X+ B& |" d( U 180 0.04488 0.0682 0.07135 0.0091 0.03623
& I- C9 ?6 @$ c 240 0.03653 0.06488 0.08945 0.01828 0.05452
7 \0 i7 D2 J! f% B! c 300 0.02738 0.05448 0.09098 0.0227 0.0597 M$ j4 v$ R* Q( ]& o# b7 H3 m
360 0.01855 0.04125 0.09363 0.0239 0.06495];
" L6 ]* w8 ^; f' Q- c0 `k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值, Z( h; R0 {/ Z! J: c) v
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
0 w) y% y3 u7 n( G6 {7 x* Y3 `ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
" F, S; v6 W+ i8 bx0 = [0.25 0 0 0 0];
4 z4 ^. q! K2 ^- d% [" |yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
( E5 K$ F& R F0 B4 ]% warning off, M3 E+ ]6 U* m0 K! f
% 使用函数 ()进行参数估计
( A% c, [$ [5 r2 h# P( p[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);/ F" G$ E$ B5 s8 D8 M% N' a
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')/ j) H7 Z9 ?& y+ ^0 O
fprintf('\tk1 = %.11f\n',k(1))
4 C5 K- d% U( L* W# |/ Xfprintf('\tk2 = %.11f\n',k(2))3 s4 m5 n" h$ @, j
fprintf('\tk3 = %.11f\n',k(3))9 }: r y# i% |+ l3 R
fprintf('\tk4 = %.11f\n',k(4))
, I8 G4 O5 P; h+ _2 y0 j$ Sfprintf('\tk5 = %.11f\n',k(5))) b, w& f4 G0 W& s6 ]' s9 b I, |
fprintf('\tk6 = %.11f\n',k(6))% u( v6 C9 ?# x( \7 j) ]: z' K
fprintf('\tk7 = %.11f\n',k(7)) D4 P3 G/ G: g; F2 b
fprintf('\tk8 = %.11f\n',k(8))
. ?9 }2 r/ p! Z9 k `6 S& Q8 Vfprintf('\tk9 = %.11f\n',k(9))4 ?1 c* L+ n2 c4 q$ H
fprintf('\tk10 = %.11f\n',k(10))
8 u: c& c f3 Z9 o) ^4 }# [fprintf(' The sum of the squares is: %.1e\n\n',fval)0 @# m/ N/ }4 E ]/ I# N
k_fm= k;& J: l4 l% d& E) Q
% warning off
0 w6 F' H, ~6 R( ~$ T0 l* O% 使用函数lsqnonlin()进行参数估计
- w( ?$ _9 R3 P( T) G( w; f[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...# r2 l8 T! b: t5 A' I/ J" b% ^, G
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); % }; Z# ?3 t& g0 m( G4 M
ci = nlparci(k,residual,jacobian);1 Y% b0 L' A7 N: T) K
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')% i+ N. W# Z: I1 u+ _' }
fprintf('\tk1 = %.11f\n',k(1))
+ i8 a) R v( Zfprintf('\tk2 = %.11f\n',k(2))
# S, n+ o% k& f' }9 ]+ C0 ~* _fprintf('\tk3 = %.11f\n',k(3))/ B1 B V3 i' V4 p w8 e+ a
fprintf('\tk4 = %.11f\n',k(4))5 n* [- {' B5 [
fprintf('\tk5 = %.11f\n',k(5))( N2 q: x+ d6 ~6 W$ Y
fprintf('\tk6 = %.11f\n',k(6))1 |# y6 A+ U5 [4 G( E2 i
fprintf('\tk7 = %.11f\n',k(7))
2 h$ X8 f/ o9 W5 ^0 N7 ]1 o3 qfprintf('\tk8 = %.11f\n',k(8))
( _0 q; p& ?4 o$ \fprintf('\tk9 = %.11f\n',k(9))( ~4 T& s; a& Y5 n2 e: t
fprintf('\tk10 = %.11f\n',k(10))
1 Z' R$ w+ g9 m* }1 efprintf(' The sum of the squares is: %.1e\n\n',resnorm)
' {$ Q5 y7 B5 n4 E$ @ Uk_ls = k;1 v7 w: `5 j6 @
output
: q- y w5 o0 s; n0 l. o1 x5 Y/ }warning off7 {3 r; K+ g' @4 Z+ E
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计 P( {4 ~& h" J( c. T* y) |
k0 = k_fm;, R4 i$ Y* j: A* D
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
+ K8 E5 ]( i9 q" W* r lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
& m X4 q' W E Lci = nlparci(k,residual,jacobian);
( X6 S& b% M% r9 p* h a1 Dfprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
5 j) g$ y! m5 R6 g/ {6 j3 rfprintf('\tk1 = %.11f\n',k(1))
: o3 z. a6 `% pfprintf('\tk2 = %.11f\n',k(2))7 s) L3 L6 Z) f- Z8 p g' a8 Z, o
fprintf('\tk3 = %.11f\n',k(3))/ X5 L: d4 o( l# `. r, Q. ?
fprintf('\tk4 = %.11f\n',k(4))
# }0 N1 I7 O* M' r" @! r6 p! Kfprintf('\tk5 = %.11f\n',k(5))
1 M8 H; U2 X1 }' s- ^fprintf('\tk6 = %.11f\n',k(6))0 P9 F! G0 Z# n" l: u- F5 k$ K
fprintf('\tk7 = %.11f\n',k(7))
& C; k1 R& d: U) L6 d2 Kfprintf('\tk8 = %.11f\n',k(8))
8 @: G' P. B3 N! r* z Rfprintf('\tk9 = %.11f\n',k(9))# O: t# m) ?. ?% K4 k
fprintf('\tk10 = %.11f\n',k(10))
% L E, g6 w9 W" dfprintf(' The sum of the squares is: %.1e\n\n',resnorm)- E1 E$ C1 J$ A2 M5 k5 m# }
k_fmls = k;
. K" ?' k9 W9 R6 u: a$ t/ w/ houtput( Z4 A0 J% U" H( S
tspan = [0 15 30 45 60 90 120 180 240 300 360];* F6 P' m+ i, ~6 s5 _4 I* V+ s$ U% i
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
# k5 S# }1 F3 y3 Tfigure;4 ~$ I$ H# `* H5 Q
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
, O' V3 W0 K8 ?$ R4 z" ]" Dfigure;plot(t,x(:,2:5));
) R# M7 ?6 k0 A0 v+ H0 N: qp=x(:,1:5)
* B) q! v( j$ N0 ^/ e& F6 Zhold on6 e% d7 U$ F( T N. B$ N
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
) o5 v: G' ?( ]4 x6 |! P+ Y% z
6 t1 }, Y& i. J0 u# h. _% U* X
. @8 }+ \) [5 L( W6 U
1 O" K, P- b6 p0 p/ lfunction f = ObjFunc7LNL(k,x0,yexp)
8 \5 r; J6 S% P. jtspan = [0 15 30 45 60 90 120 180 240 300 360];
& X0 W S' `- X: P' l[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
9 k. D/ U$ h- t# b0 Jy(:,2) = x(:,1);
$ ?7 w K! D0 r4 y" d& H2 ey(:,3:6) = x(:,2:5);' C3 a1 C6 c8 E
f1 = y(:,2) - yexp(:,2);
, K% c; K7 t* M* _, w3 B3 Uf2 = y(:,3) - yexp(:,3);. C5 ^" D+ e3 ~* k
f3 = y(:,4) - yexp(:,4);
s1 g$ A, G# b" f; i; ?/ |f4 = y(:,5) - yexp(:,5);
4 k& f. T8 V/ r) af5 = y(:,6) - yexp(:,6);$ o) k( D e* m3 y% I% \+ @3 O
f = [f1; f2; f3; f4; f5];
9 N% u) {: V* Q1 f5 M% M- J% J& R( O
/ u7 [) H) L, n
7 A9 S! ?# D* \( e) |) i0 Q! i+ C# s( d/ f n( z+ ]$ A
function f = ObjFunc7Fmincon(k,x0,yexp)
* Y7 l0 Z0 ]& T% C# a$ `9 L: T, ftspan = [0 15 30 45 60 90 120 180 240 300 360];! L# [9 Y b. w3 B! e2 ]' b4 W
[t x] = ode45(@KineticEqs,tspan,x0,[],k); % i7 m. M9 N# J; D
y(:,2) = x(:,1);$ p: z. [4 _$ U3 ~. C
y(:,3:6) = x(:,2:5);( N7 O- J7 J! F. d+ x
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...8 m3 E7 C& ?# I4 u7 ]2 u
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) .../ [4 t3 G) X' o4 h* i0 q
+ sum((y(:,6)-yexp(:,6)).^2) ;
* i8 g3 B7 ~* z1 ^ V/ J1 N0 P+ q0 H0 }1 p
$ }0 S& Y& i0 i
: L$ T: F: {$ ]3 s! o) }; v, n& ?( }0 W+ L% L2 ?
function dxdt = KineticEqs(t,x,k)- ^% }' D: r" [1 L5 n5 ?
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
9 K& ?+ @! O8 \6 pdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
* t0 S% c& y5 z# o* s7 j, ddFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);3 E c I% M- t" e$ E @1 c
dLadt = k(7)*x(5);
6 s2 d% c& U: D: MdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);) w1 i5 K0 T: V) z" |4 N9 u: Y4 p
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
+ u3 B9 T5 a* ~# M3 z/ {: p3 u8 S0 n. `& p# Z) N
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