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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit0 o( T- A* G/ U9 h+ }
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4& E+ ^3 C% S7 t( Y) i, `
% k6->k6 k7->k76 B; I+ R9 \0 g* T
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
; |& v6 @: t$ o) T% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
' u l: g, B; N$ b% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);1 Z6 L) Y* a/ k& m
% dLadt = k(7)*C(Hmf);
% W G! L$ l7 r1 D- P' g%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf); p8 b) s' v/ s6 Q5 g4 e8 [
clear all3 K+ x, @+ E, w9 Q6 x/ J! y
clc
1 S. u0 a+ r: _" z1 n! i/ }format long, a7 T$ E, H0 d$ a3 x( f7 z
% t/min Glc Fru Fa La HMF/ mol/L
) x' t8 F! Q, |* o0 B( H0 \3 l/ d Kinetics=[0 0.25 0 0 0 0
/ H$ j* K4 _' Q' L5 n# U* w 15 0.2319 0.01257 0.0048 0 2.50E-04
' \5 g* z4 E7 a8 v, }3 \: ?# S6 H 30 0.19345 0.027 0.00868 0 7.00E-04, h- ]5 h" d( a, ]& Z& B! ^# x
45 0.15105 0.06975 0.02473 0 0.00332 o% t* Q$ a) l: B0 D6 F0 B% o
60 0.13763 0.07397 0.02615 0 0.00428
$ P5 r+ }/ j; a- p9 f7 I5 G& k4 C 90 0.08115 0.07877 0.07485 0 0.01405
4 i7 x, E, p: q 120 0.0656 0.07397 0.07885 0.00573 0.02143( X4 N) W" s5 `7 ?% \2 E
180 0.04488 0.0682 0.07135 0.0091 0.03623
# U U" o. y; q$ ~3 M4 A' w 240 0.03653 0.06488 0.08945 0.01828 0.05452
: n& \: u6 b1 c, K6 W; t 300 0.02738 0.05448 0.09098 0.0227 0.0597
+ O: `* ~" X* }& w8 r" { 360 0.01855 0.04125 0.09363 0.0239 0.06495];
* G2 R" Z8 ]* O1 Uk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
# ~ W0 P3 U, @% Z. Elb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限9 R a; G: }: S# c
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
D4 p: T% g+ U: }7 l1 m+ _x0 = [0.25 0 0 0 0];9 D! T; {# t. W$ q
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]% r$ s4 v3 T2 U& G2 ?* x2 W) j
% warning off
# P N) S; \ D* v- K. X% w% 使用函数 ()进行参数估计" J" P4 u3 t7 h
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
7 m* C" O8 B. e" \6 H& ^* lfprintf('\n使用函数fmincon()估计得到的参数值为:\n')
- W) X& ` V0 n% W( xfprintf('\tk1 = %.11f\n',k(1)), j, U) p" i# Q; u
fprintf('\tk2 = %.11f\n',k(2))
, H! I! T7 M4 R3 F9 I" Hfprintf('\tk3 = %.11f\n',k(3))
6 O; e- N2 ]6 n2 d: ?" C7 m, mfprintf('\tk4 = %.11f\n',k(4)) w3 Z$ e# B% `7 D* O9 w
fprintf('\tk5 = %.11f\n',k(5))
: d2 M% c' b1 G, i8 c9 J6 C: Tfprintf('\tk6 = %.11f\n',k(6))
/ Q1 l: ?. [& f0 l/ A0 hfprintf('\tk7 = %.11f\n',k(7))/ a. c& w0 R2 `, ~
fprintf('\tk8 = %.11f\n',k(8))$ S/ Z" C0 Q+ E
fprintf('\tk9 = %.11f\n',k(9))1 o- S/ T4 p- F- l# j
fprintf('\tk10 = %.11f\n',k(10))
, V% I; h; ] \/ ]' ifprintf(' The sum of the squares is: %.1e\n\n',fval)
4 `' I+ v* |; k" j2 N& Xk_fm= k;$ P+ f! `5 f$ Z) E9 A; \ }% x
% warning off
6 T4 d* k d' a3 T, E8 {: L- K8 s% 使用函数lsqnonlin()进行参数估计) Y8 @: `$ ~5 V8 w- D
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
6 B6 N! @3 m2 _! S) i2 ` lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ; m: h2 h; P) `% Y) d0 A8 i# h
ci = nlparci(k,residual,jacobian);
0 y* [( Q* ]. M$ V( M2 F7 \fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
) X7 G& S, P3 Q* s. K1 Q3 zfprintf('\tk1 = %.11f\n',k(1))
0 Q9 }" m& i: C' r5 W2 Ffprintf('\tk2 = %.11f\n',k(2))
7 g8 g9 h- x) m4 ]fprintf('\tk3 = %.11f\n',k(3)). z, U+ e' w. r; m+ l8 _
fprintf('\tk4 = %.11f\n',k(4))
) p7 o* |' \6 w! |& s, b' Ifprintf('\tk5 = %.11f\n',k(5))
5 P; r y. A Ufprintf('\tk6 = %.11f\n',k(6))0 T! w. }3 p' m7 d' `
fprintf('\tk7 = %.11f\n',k(7))
# n7 p- j7 _+ E( C( V; u5 hfprintf('\tk8 = %.11f\n',k(8)) t6 |; X; L6 h4 c8 P
fprintf('\tk9 = %.11f\n',k(9))
/ L5 P3 o, w% K4 l2 w7 Sfprintf('\tk10 = %.11f\n',k(10))
7 }) E. T$ W: l! I6 Gfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
) Q9 o2 o. A. V+ v/ A/ M( V8 @k_ls = k;
' @5 l: X& J, r! y% V3 zoutput
, D* v9 k' _4 b+ Q9 Gwarning off
- O3 m, V* l* I* ^4 n% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
' r1 w! D0 ]3 p* S2 B9 K& \0 ek0 = k_fm;. M) E6 h! g! [, P" i/ v) P Y& b
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...4 A0 R5 d7 T8 h
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); . i, }* i: E# k
ci = nlparci(k,residual,jacobian);8 l9 A% w6 R( ^
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')5 ^: ~ s' }% x: k
fprintf('\tk1 = %.11f\n',k(1))' ?9 \" k% X9 K+ t' a' x
fprintf('\tk2 = %.11f\n',k(2))
2 l8 g P0 ]9 d( ~* wfprintf('\tk3 = %.11f\n',k(3)): X/ s# e7 p8 M( U; Y
fprintf('\tk4 = %.11f\n',k(4)) ]9 U C0 Y. N7 D9 Q) a
fprintf('\tk5 = %.11f\n',k(5))% g; I+ e2 r/ _7 N6 z
fprintf('\tk6 = %.11f\n',k(6))
; N8 t8 A( H2 K9 Ifprintf('\tk7 = %.11f\n',k(7))
( U, n6 l) V/ `! B8 t* G1 Zfprintf('\tk8 = %.11f\n',k(8))
( N4 I+ I! q& d% E6 [fprintf('\tk9 = %.11f\n',k(9))
3 e" J5 W: R0 l& Yfprintf('\tk10 = %.11f\n',k(10))+ o; L* m2 i% P5 U
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
' h0 E8 Z9 P" g4 Tk_fmls = k;
1 R8 O% U* x4 Houtput4 x3 n: |( L) C- n9 t9 L' v: Y
tspan = [0 15 30 45 60 90 120 180 240 300 360];
3 i0 h2 \9 D9 f) I[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
: ]+ _0 C' g8 a7 p1 Mfigure;
$ I1 a6 Y5 h# N: uplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')7 a1 V* w8 b. t0 d% {" G# t
figure;plot(t,x(:,2:5));
8 E7 ^3 G4 Q, F- D& Zp=x(:,1:5)
@1 D5 I1 P0 Nhold on9 k' A) |5 x& F: A
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
3 y. j" D5 y$ A" L- c7 I3 o
: a6 a# p7 O/ Z9 d" L! k$ W; b. u$ X3 y) X; k
8 L/ q/ |$ F6 o/ G2 s6 e0 Y
function f = ObjFunc7LNL(k,x0,yexp)
' H/ U9 r: I# D# l: E( stspan = [0 15 30 45 60 90 120 180 240 300 360];* Y& N% M2 w7 {7 M: z5 O& |" L
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); 6 |* r' e# B. {1 d! `2 c8 f; V
y(:,2) = x(:,1);
' d h$ ?$ t# {+ j# v* N5 B& iy(:,3:6) = x(:,2:5);
5 m) I* ]( u$ Z0 ^5 B9 if1 = y(:,2) - yexp(:,2);8 d$ H( t: t. s Y& k
f2 = y(:,3) - yexp(:,3);
8 b3 w8 S" L9 x; @& \f3 = y(:,4) - yexp(:,4);
3 X7 r% B1 Y7 S7 w( H# \( ]f4 = y(:,5) - yexp(:,5);
) h0 s8 E* E1 G+ L" H4 h! D$ Rf5 = y(:,6) - yexp(:,6);
9 w( G9 _% P% d+ l5 uf = [f1; f2; f3; f4; f5];4 j) C7 t$ _$ {- }1 ^
. o/ n) @- @+ \4 E% @8 S6 B' L& q3 a( q) `4 i* k
& V1 U% ~3 B1 H/ z9 Y" Xfunction f = ObjFunc7Fmincon(k,x0,yexp)9 N* o7 x% Y; `
tspan = [0 15 30 45 60 90 120 180 240 300 360];5 C& t. N f/ L( H7 y# g
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
: u# S- f! {$ y6 y1 Xy(:,2) = x(:,1);
4 p3 r0 ?$ D! @. Yy(:,3:6) = x(:,2:5);
' i0 o. ]9 M# x2 yf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
$ E( s: @: W; C# f0 p6 C, ~ + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
$ w; [5 ~( ]# D, k* x + sum((y(:,6)-yexp(:,6)).^2) ;
2 Q5 g3 `+ K% f; h: ^
$ o s% ^6 V- Z `+ C+ O8 J8 {9 \ E6 S9 B- R
# T0 U% q# {( r4 j
) k) p4 F& w1 _8 o2 a6 Wfunction dxdt = KineticEqs(t,x,k)
! Q9 D) |1 r, M( HdGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);2 z: M3 \: p' a! r
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);3 Z+ W3 D) F7 X1 x7 g. f
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
9 f& L+ p* j0 m s4 RdLadt = k(7)*x(5);
, {* u$ \/ J" I/ U+ `' w) @& zdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
1 c0 C. m0 Z6 _ o3 ddxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];( q$ Y& F, ^* {
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Glc.zip
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