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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit6 R# \/ v6 z3 B1 Q/ R0 K
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4$ c2 _5 R# b8 ?& o
% k6->k6 k7->k7
5 R( F* n: H2 j1 \% h% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
8 C( ~9 c# l" D2 U% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);# I3 }% Z4 n% ~, B
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);' E) V- k' q2 |* s s
% dLadt = k(7)*C(Hmf);2 [4 q( N& I+ }2 v, f# o
%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);+ n5 M1 I8 }% \
clear all: w0 }3 @* F1 t
clc
6 e, y; |2 o6 C9 T( m3 U7 N+ Oformat long/ x, T( U6 Z2 L! A) B/ \( a
% t/min Glc Fru Fa La HMF/ mol/L
; m! h, J& h4 j1 X Kinetics=[0 0.25 0 0 0 0
! L: j" [, ~$ P3 P0 p! r: K 15 0.2319 0.01257 0.0048 0 2.50E-041 Q# w9 i e" c1 t0 c- R% K* I
30 0.19345 0.027 0.00868 0 7.00E-04
; q$ h0 Q" I. N 45 0.15105 0.06975 0.02473 0 0.00335 S7 o) O. v. ~. Y( W
60 0.13763 0.07397 0.02615 0 0.00428& h J& Y! [% W2 j) @2 a9 p
90 0.08115 0.07877 0.07485 0 0.01405% C$ m2 D. @" { j; s P3 X! o
120 0.0656 0.07397 0.07885 0.00573 0.021432 U! x# ?# c' z
180 0.04488 0.0682 0.07135 0.0091 0.03623
8 ^+ o D$ [5 `! r; B 240 0.03653 0.06488 0.08945 0.01828 0.05452
8 w( |$ V5 P3 }6 |7 G 300 0.02738 0.05448 0.09098 0.0227 0.0597! D) t2 }3 z7 v* Q- F
360 0.01855 0.04125 0.09363 0.0239 0.06495];' d& e1 f& L+ f6 Z& c3 }( m. z
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值/ ], W7 c6 v: N
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限$ _ \! S$ _7 _2 Y
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
, b" W! ^( M' ]x0 = [0.25 0 0 0 0];
' V5 ~3 |/ m" b! \, {0 n' Lyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]8 Q$ n" R/ q) ^ R) [1 ]1 e
% warning off* p/ F0 @+ s0 b g R. K' U
% 使用函数 ()进行参数估计( X. |# T& _9 o" t3 ]
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
1 I5 H2 p. V# v$ C; w6 gfprintf('\n使用函数fmincon()估计得到的参数值为:\n')
: y# p) Y( r& V: j) C1 O! o/ S# `fprintf('\tk1 = %.11f\n',k(1))/ ?! z! c6 V Z* U5 F8 N/ y
fprintf('\tk2 = %.11f\n',k(2))! y; `& \( B0 M$ [+ i7 u' }
fprintf('\tk3 = %.11f\n',k(3))) H0 R6 C; C# o8 ?5 M3 Q
fprintf('\tk4 = %.11f\n',k(4))
i# c* x# P, p3 ~fprintf('\tk5 = %.11f\n',k(5))9 Q) c. }( l) E* |; x
fprintf('\tk6 = %.11f\n',k(6))
' \# W( B( l2 M8 s0 R7 p2 Wfprintf('\tk7 = %.11f\n',k(7))" I4 p' U3 i7 L* g9 j
fprintf('\tk8 = %.11f\n',k(8))3 t% w( l" }' p \1 R
fprintf('\tk9 = %.11f\n',k(9))% E4 f: P1 r5 X; F' }2 R! D
fprintf('\tk10 = %.11f\n',k(10))" C% K$ e, h' q6 [& v& f: h0 m
fprintf(' The sum of the squares is: %.1e\n\n',fval)( U7 A5 }# _4 u! n6 d s) g4 y0 T) s
k_fm= k;
1 ^; V _8 C7 N9 O/ V/ V2 U# u% warning off! H5 Q+ I/ O. A
% 使用函数lsqnonlin()进行参数估计
* _3 A9 v! ]3 [; K[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
5 T0 b2 R6 ^4 N' c lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); * G% _3 `6 |8 Q6 ^ n) {" X- N. [
ci = nlparci(k,residual,jacobian);. U4 P9 Q& e) J* v$ m4 ]
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
" }3 I% A, ~% w8 ?8 [& Ifprintf('\tk1 = %.11f\n',k(1))5 e J {2 X9 t. c0 B
fprintf('\tk2 = %.11f\n',k(2))
* Y8 c3 I! ^, l8 S9 ofprintf('\tk3 = %.11f\n',k(3))
3 ^' L# _6 ]; Bfprintf('\tk4 = %.11f\n',k(4))
9 B! S* n: x0 j" n+ w. Lfprintf('\tk5 = %.11f\n',k(5))
; g+ x* B+ I: W; sfprintf('\tk6 = %.11f\n',k(6))- R0 h( E5 }( G6 R! W, `& Z0 v
fprintf('\tk7 = %.11f\n',k(7)); D9 |6 w6 F R- i/ q* y. t
fprintf('\tk8 = %.11f\n',k(8))
4 ~$ A& { }4 F2 e+ t( r! U7 |( Gfprintf('\tk9 = %.11f\n',k(9))
8 | X* S2 z7 D' C# [1 j& a ~fprintf('\tk10 = %.11f\n',k(10))
4 {( N/ h7 w" k/ ^fprintf(' The sum of the squares is: %.1e\n\n',resnorm)- G( r4 M3 ]& r# T- E
k_ls = k;& ^( r% V, C: |" a" j
output ]' ^) S% O. T0 k
warning off
1 Q; p: J* j4 ?# H# A- k% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
& ~5 Z3 l y$ M( U$ Q/ kk0 = k_fm;0 ]0 t7 a$ ~; n' v
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
! ~* C( X+ y4 m. S" { lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
) g, T+ X, ~2 B+ Jci = nlparci(k,residual,jacobian);4 J7 a6 V$ [/ E
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
( \7 e& [* P" t" Vfprintf('\tk1 = %.11f\n',k(1))
" a. P4 B* R& d2 s2 `fprintf('\tk2 = %.11f\n',k(2))6 ]: H% `0 z: |& ?; n9 R
fprintf('\tk3 = %.11f\n',k(3))2 B% K h" w9 o, q& y1 p2 t
fprintf('\tk4 = %.11f\n',k(4))) `1 [! x6 n' f# `; s2 l( z
fprintf('\tk5 = %.11f\n',k(5))
, C; z/ n- W Zfprintf('\tk6 = %.11f\n',k(6))
- j. u! b! b7 j: Cfprintf('\tk7 = %.11f\n',k(7))/ L; r. e9 {) G
fprintf('\tk8 = %.11f\n',k(8))+ }2 D7 \- x. ^9 M
fprintf('\tk9 = %.11f\n',k(9))
4 I q2 g8 ]7 b, nfprintf('\tk10 = %.11f\n',k(10))
J" ^# `8 L. hfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
3 C% X+ [0 Y# {k_fmls = k;
7 `9 [( U8 S' ?2 U0 }5 uoutput
" b5 ]& o) g8 I- F2 {tspan = [0 15 30 45 60 90 120 180 240 300 360];
: O: g+ S9 E: C. T1 C% e) B6 ^[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
! w1 R" i# _1 H! Z& xfigure;* D: ~9 E2 d/ B/ c( S
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
1 q' k0 k/ U2 f" W* {- x$ \figure;plot(t,x(:,2:5));
2 p' r. b- l. v1 H2 op=x(:,1:5)+ j7 D" t; q' G. h& t v! S- v
hold on
' w- @. `6 O5 S& H9 [/ ^plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')1 w4 ^( n) ]5 Z- ? G
) x9 B; O$ c; P8 l2 {: E9 @! z
8 ?, j8 E) N4 O6 f" E, B# o) v1 G4 \) \$ @: k3 d
function f = ObjFunc7LNL(k,x0,yexp)
5 z. d) M' `: I+ I) ~tspan = [0 15 30 45 60 90 120 180 240 300 360];
- @& U b) m& R$ T% u4 D6 O% L3 K[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
% ?8 U" W$ s5 \6 B% t2 Q' ^3 y, ?y(:,2) = x(:,1);* m: L* X# I( O% a, v+ @& t8 k
y(:,3:6) = x(:,2:5);
# S- ?; R% m! J& ]! p% [f1 = y(:,2) - yexp(:,2);
; g4 o. p( j6 \' Wf2 = y(:,3) - yexp(:,3);$ ^& x; e: C* U- L
f3 = y(:,4) - yexp(:,4);2 G0 F8 Z, Q5 Q) g9 p1 c
f4 = y(:,5) - yexp(:,5);( ?! S9 }- L* [1 I
f5 = y(:,6) - yexp(:,6);- k$ s; M% v7 v8 G: x
f = [f1; f2; f3; f4; f5];4 A; P H8 D+ p, M/ M8 }2 k% {
. x; I+ v0 i9 \4 ]6 T
8 D- W5 ?7 X. I
/ G( ~4 J( t8 t( H9 G
function f = ObjFunc7Fmincon(k,x0,yexp)1 ~4 L2 `% F! ]; G$ ^
tspan = [0 15 30 45 60 90 120 180 240 300 360];5 l5 A0 ~' K" _3 q9 Q {
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
1 z- G3 r9 T8 w% `. f# g6 j( Ey(:,2) = x(:,1);" t( U+ p8 [* b
y(:,3:6) = x(:,2:5);
* `7 B# L7 [3 }- C7 i9 Sf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...# z: Z# D5 l) f+ E, Q+ c( R
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...- K$ N) f+ W0 N+ Y& \
+ sum((y(:,6)-yexp(:,6)).^2) ;
/ C, z5 o& v4 K; \6 K% N5 L: o" d" j6 [3 I) l5 k/ p
6 H. p1 T& v+ Q7 O$ X$ O5 ^
( v& B$ a1 X4 B& ^9 h
0 [) T6 o) a6 C4 mfunction dxdt = KineticEqs(t,x,k)* q- u, D C5 h/ f! O$ a# Q
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);& _" l0 X4 E, `4 t2 s$ J. q( |
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);4 A6 L2 v. u# ^
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
7 P/ i1 B1 m2 h! E; o0 e; HdLadt = k(7)*x(5);+ q. Z$ [6 v0 e) l$ v! x" y4 U T
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);, }, [5 a& L4 ]- |- y) o4 h% h
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
" x; r; I5 F- L0 q6 Q
5 D1 ]1 d! N0 `" w2 S8 z7 b( i! Q3 V; g$ ?% G4 x9 S& X5 F
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