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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit1 L% {# [# ]" u7 K7 q
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k41 l: P4 K& _ T, ^
% k6->k6 k7->k7
+ ^. j' x6 g3 ?% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
/ x- q- G* p& f1 ~" @% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);) @9 N$ `( `! J1 i. j8 W
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);" O a; K i; L9 f
% dLadt = k(7)*C(Hmf);
( O$ Q8 k# n' c% Q2 \, `+ B%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);' c( h( g- M( M2 E2 n
clear all; s/ w: k6 @9 O5 Y: }; L
clc# q; L& R+ ]9 q# w
format long r0 K& @3 k& V( K) V" Y
% t/min Glc Fru Fa La HMF/ mol/L 2 _' n" ^! W% E+ ]
Kinetics=[0 0.25 0 0 0 0! J5 |) g3 c( X) K% I0 ^
15 0.2319 0.01257 0.0048 0 2.50E-04
8 E4 D9 {' S3 x0 f: ] 30 0.19345 0.027 0.00868 0 7.00E-04/ g9 P2 ]5 y! |% T
45 0.15105 0.06975 0.02473 0 0.0033& \4 g3 V9 Y; c6 o9 ]( w
60 0.13763 0.07397 0.02615 0 0.00428
* g& B% @3 l; f% J8 I3 X 90 0.08115 0.07877 0.07485 0 0.014057 |6 s$ ?3 J1 W' N$ y% t+ Z
120 0.0656 0.07397 0.07885 0.00573 0.02143
2 m4 z/ m" n& q4 `: C8 X 180 0.04488 0.0682 0.07135 0.0091 0.03623
+ _; ^0 a+ y* ^" ` 240 0.03653 0.06488 0.08945 0.01828 0.05452; g; S' N" {/ h/ \$ [8 E# y
300 0.02738 0.05448 0.09098 0.0227 0.0597
: I, B4 c9 K- }+ i; B( U" A 360 0.01855 0.04125 0.09363 0.0239 0.06495];3 D7 B: O( |8 L( q
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值( f2 T4 b8 `( h0 o7 y0 R) B
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
( a% H% x) Q2 d1 ]! z; \: `; H! tub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限+ @9 R) U! A# q
x0 = [0.25 0 0 0 0];
5 Z- C# X$ Q- d: T; t, C4 B byexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]
* L" j6 M; D# u8 I- w- a% warning off4 U: M1 O# a; ]4 C/ w
% 使用函数 ()进行参数估计
5 }9 B/ l6 g' X[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
% R G9 G) A& a2 xfprintf('\n使用函数fmincon()估计得到的参数值为:\n')4 Q* ]! m7 L" R
fprintf('\tk1 = %.11f\n',k(1))
6 s% ]" D' H3 |7 I6 Yfprintf('\tk2 = %.11f\n',k(2))
1 R' `( r2 u8 z6 |- `6 cfprintf('\tk3 = %.11f\n',k(3))) }5 [: [: S& F5 a: o* ?( }2 j
fprintf('\tk4 = %.11f\n',k(4))
/ L7 a( |, }3 G& A$ S, W: N( @fprintf('\tk5 = %.11f\n',k(5))
6 u0 U, E: K, ufprintf('\tk6 = %.11f\n',k(6))0 d5 }* n5 x3 h* z% @2 x* {
fprintf('\tk7 = %.11f\n',k(7))
% o! \4 a) j* i t; z" ]5 }3 Sfprintf('\tk8 = %.11f\n',k(8))2 T2 ?3 U5 g& a% V& Q5 N( l9 L
fprintf('\tk9 = %.11f\n',k(9))
3 _3 E4 C8 r, v1 Y6 A; e! W0 Ufprintf('\tk10 = %.11f\n',k(10))
) M% k) N2 Y% y( q/ hfprintf(' The sum of the squares is: %.1e\n\n',fval)
' z: q7 d }% b8 pk_fm= k;
! D: _0 h# d# ~$ O+ a% warning off5 t0 G: R X0 w
% 使用函数lsqnonlin()进行参数估计4 T6 i% ?9 R b& L5 C% z6 R) B9 u% }
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...& W3 t+ z- s4 F
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
3 [9 n$ E0 r" x; E5 Bci = nlparci(k,residual,jacobian);
+ V, w- Q/ U( D2 j6 Mfprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')6 T& K& h5 a6 i/ }0 p4 L
fprintf('\tk1 = %.11f\n',k(1))
; t1 T4 N. b8 |3 P ]3 Wfprintf('\tk2 = %.11f\n',k(2))) o6 k- i2 k7 J9 ?% G4 Q" T. D/ d& \
fprintf('\tk3 = %.11f\n',k(3))
2 R' e: D9 ~0 ~. ~& s+ Q3 y9 Tfprintf('\tk4 = %.11f\n',k(4))
# z/ \2 U3 ?9 b* \4 A8 Ofprintf('\tk5 = %.11f\n',k(5))+ I- i/ X3 {6 B7 g7 g
fprintf('\tk6 = %.11f\n',k(6))
/ Q4 n4 `5 z4 b* L" ]- V+ bfprintf('\tk7 = %.11f\n',k(7))
7 T& r" s- e- ~$ J' K! u4 h$ Dfprintf('\tk8 = %.11f\n',k(8))* j( ?+ b5 h' M$ p! p8 A/ e& d
fprintf('\tk9 = %.11f\n',k(9))
* M7 p+ S( P# y, n2 [1 i5 g( Q5 Dfprintf('\tk10 = %.11f\n',k(10))$ \7 C: q j- Y6 O. V7 i, n
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
' C- I4 o# L, P; N4 U$ A0 o9 gk_ls = k;
( ~$ v1 U" u# P6 Q) U5 j Joutput! N1 f% I. K# X0 {& ~
warning off! ?+ q8 _7 j& v$ |3 ] T3 o
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
& K+ o) n' u- M" A( Ck0 = k_fm;8 v9 t' p7 J8 R" Y" I! Y L
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ..., p0 O( g! x% k4 l+ _3 n
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
9 Y0 Y: b* }0 y1 _8 [: e2 z) xci = nlparci(k,residual,jacobian);
' K( H) U( A. Afprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
& a% M$ a7 h/ |- I" `0 I2 E9 Pfprintf('\tk1 = %.11f\n',k(1))+ t4 M" y {& M9 y# U1 k& ], Z
fprintf('\tk2 = %.11f\n',k(2)): R+ |, i w' U2 t' X0 _" w. S
fprintf('\tk3 = %.11f\n',k(3))
6 ^. r3 Q2 n1 y8 W7 Nfprintf('\tk4 = %.11f\n',k(4))0 |5 S% E+ [+ Q. X1 }
fprintf('\tk5 = %.11f\n',k(5))9 Q$ K2 Q+ i# `
fprintf('\tk6 = %.11f\n',k(6))3 w' u( ^. G5 V4 \
fprintf('\tk7 = %.11f\n',k(7)): ^/ c+ s1 v; H6 }
fprintf('\tk8 = %.11f\n',k(8))
1 g! u! d! m+ h5 R: U+ tfprintf('\tk9 = %.11f\n',k(9))+ E t# I i; S# \4 y6 p
fprintf('\tk10 = %.11f\n',k(10))
. c# k+ G' w7 H7 Z; W- u; Jfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
$ Y+ y5 j7 J$ v: Wk_fmls = k;2 u! _3 B2 X: }3 A. c. G2 _5 q6 O
output
) G0 j/ w, A* `) z" x! c. u# C+ ]- otspan = [0 15 30 45 60 90 120 180 240 300 360];
. a4 `8 N5 ~5 K7 ~[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls);
& x4 n! n y2 m' ]1 xfigure;# W9 ^2 j8 s) _5 N7 y. `* m3 n2 Z
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
! T+ G* f* h$ B k, R4 Lfigure;plot(t,x(:,2:5));4 V8 D2 j# z) [# ~+ w, _3 w
p=x(:,1:5), j5 r+ e5 V9 N7 h3 N
hold on, s5 k/ A! T/ d* `* |$ I
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real'); v6 v6 A: {9 n. C9 l8 n
5 u- t0 n' @& F" ]1 n% n$ t
- a# Y+ v3 x+ |$ ^6 e- P
/ H: L2 j* }& }9 T/ Hfunction f = ObjFunc7LNL(k,x0,yexp)
9 r1 z7 ^$ \. l$ Etspan = [0 15 30 45 60 90 120 180 240 300 360]; @+ n6 ]* p& y! Y6 e5 a& A$ U' R# H
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); 8 d/ f" ~6 ^+ h: m% D
y(:,2) = x(:,1);
% ^# @/ A' `* Z1 j" p4 py(:,3:6) = x(:,2:5);
# X' w, q' q6 K6 E$ |& h( t3 if1 = y(:,2) - yexp(:,2);$ c' g0 U, R. i% l. \
f2 = y(:,3) - yexp(:,3);# K3 {7 S# m4 f+ L
f3 = y(:,4) - yexp(:,4);
# u+ R. @) C6 C; k! r$ U* L, X4 \f4 = y(:,5) - yexp(:,5);8 s+ l, _/ w! u4 L
f5 = y(:,6) - yexp(:,6);
% ]8 B% O, j1 gf = [f1; f2; f3; f4; f5];
$ R- o4 X/ w# {& @7 q% }3 a0 H7 U* z/ S# E( Z6 h$ o
& M" u+ j0 w* ]$ O, L* ?$ D1 a; Y) i
9 n! X" v; m6 l7 M% N4 sfunction f = ObjFunc7Fmincon(k,x0,yexp)
- f7 n* m* f9 R' h1 b+ @! vtspan = [0 15 30 45 60 90 120 180 240 300 360];& p( \7 u( p* `7 C
[t x] = ode45(@KineticEqs,tspan,x0,[],k);
/ N! V1 ^* o0 |* ~ W; x; Qy(:,2) = x(:,1);& z/ _; @( U: [) K g2 T' |9 q
y(:,3:6) = x(:,2:5);
, X) B* M- w! y5 t3 u+ {f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ..., M4 {. }' x: e) f& i
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
, i0 Y" u# g8 U9 G) i/ E6 K% \" S4 \ + sum((y(:,6)-yexp(:,6)).^2) ;7 L/ u* Y2 Y! J2 F
6 I/ m4 x$ A( E9 R- I. I5 P
1 h: b! z; q5 I R7 F9 R& G; q/ X! Y2 [9 y* I; ~3 u* Z
. ?9 g' A- m; D2 \' M
function dxdt = KineticEqs(t,x,k)' h9 R7 g( Y/ w7 U$ M
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);6 E8 p: G ?/ u. d* |3 H) c
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);2 J: r% S: l' Y7 m* w$ L2 U ~- |
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);2 [) {1 p3 F. ^6 M9 G3 u2 A
dLadt = k(7)*x(5);
1 |6 M2 N$ w* U- K; L7 PdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
) I9 `5 n7 n* N3 I( jdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];: u9 s$ `) k, X" r% M' `) F
f. h2 k8 w2 d, V4 {6 T, W9 M' S+ `% `8 }( A8 P
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Glc.zip
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