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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit
( h$ c9 \8 Z$ w9 Q7 F3 C _% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k42 j6 w7 w) |0 |! h6 T
% k6->k6 k7->k7
4 ]1 s4 B- R& O0 C: P5 ^4 S% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);2 w& i- r0 I/ n7 k9 }2 a9 \( D
% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);5 f1 J+ @2 h4 a
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf); X4 i. L4 _7 x; M. w
% dLadt = k(7)*C(Hmf);
% `" O' N+ q: Z; b. `2 ?%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);) L3 |, P1 I g6 B* V2 B: P5 q
clear all
/ F2 y) p" D& `: O$ Gclc7 i$ `; i# j+ C' Z5 {
format long. {! ?2 p R4 Q) g5 \8 ?
% t/min Glc Fru Fa La HMF/ mol/L
# g& Y" A) d( @# R) B Kinetics=[0 0.25 0 0 0 0 S5 O$ K8 I$ t# |6 f
15 0.2319 0.01257 0.0048 0 2.50E-04
" |5 }) B5 S4 K' Q+ f 30 0.19345 0.027 0.00868 0 7.00E-041 N7 x$ ? {5 b: E$ z+ F
45 0.15105 0.06975 0.02473 0 0.0033
$ C0 O8 e2 H0 t( ^# t1 o8 b 60 0.13763 0.07397 0.02615 0 0.00428
3 H% L( d/ ?% n" f! p 90 0.08115 0.07877 0.07485 0 0.01405) S6 v3 f) N ?# T: e' {
120 0.0656 0.07397 0.07885 0.00573 0.02143
1 _& Y$ [, X. U" W* c 180 0.04488 0.0682 0.07135 0.0091 0.03623
0 g: P+ J; G; m( _6 X3 C6 u' J 240 0.03653 0.06488 0.08945 0.01828 0.05452; ^. W# r! H# W$ M, k0 l* }! L
300 0.02738 0.05448 0.09098 0.0227 0.0597
% H- E9 A" E, c! c f+ J 360 0.01855 0.04125 0.09363 0.0239 0.06495];( u( A) U: A2 P }0 ~; ]
k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
: B3 y3 m) X1 | Slb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限( |9 E8 M) N0 |5 g; n2 z% O3 l
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
6 e7 p8 q& |* yx0 = [0.25 0 0 0 0];
, H6 B5 _# j- p8 a1 lyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]* X" w, }- P8 |% Y" O4 K- ~0 r
% warning off
$ F1 g/ I1 u0 S3 F* B+ F/ J% 使用函数 ()进行参数估计
9 O+ o7 m+ R x4 f* `3 l" |[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);1 x3 m& e: O; \9 S5 U3 i
fprintf('\n使用函数fmincon()估计得到的参数值为:\n')
1 \, s' c5 M. T; [; x5 T7 C' Sfprintf('\tk1 = %.11f\n',k(1)). H* k4 l- e& {: h' p- R- s' }
fprintf('\tk2 = %.11f\n',k(2)); M1 n8 x W4 h, f7 P5 ^
fprintf('\tk3 = %.11f\n',k(3))' N2 b K( a+ s% N" A+ x) ?
fprintf('\tk4 = %.11f\n',k(4))
: j+ H! ]$ R3 D& N9 h: Efprintf('\tk5 = %.11f\n',k(5))/ W% p2 q8 ?8 o8 O" r
fprintf('\tk6 = %.11f\n',k(6))5 ? w t$ x2 Y& T
fprintf('\tk7 = %.11f\n',k(7))
( S3 {: {/ t- ?) ?0 Yfprintf('\tk8 = %.11f\n',k(8))
- c2 V d1 ~: Z \1 |0 V# y6 mfprintf('\tk9 = %.11f\n',k(9))
) A( L( g0 @ q% N# ]fprintf('\tk10 = %.11f\n',k(10))
; x, F, k% o( R* u8 n) S& sfprintf(' The sum of the squares is: %.1e\n\n',fval), V! n. M4 p$ l2 W( r
k_fm= k;; g d: X% a7 k
% warning off
' Q4 b4 d2 l6 @% 使用函数lsqnonlin()进行参数估计
, f( m% m! z; a) @ f2 S[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...% Y+ q- u5 Z% V: y+ v
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); 3 j7 N* t' J" ~% z4 l
ci = nlparci(k,residual,jacobian);' o3 w+ N+ I% b9 F/ `6 W y, @* {' w
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')( ]7 e- @: m$ g3 ^; O; _
fprintf('\tk1 = %.11f\n',k(1))0 a- o9 ~) a, a' e. N/ d" r$ F
fprintf('\tk2 = %.11f\n',k(2)) w: Q+ C! a- i' M% D2 k
fprintf('\tk3 = %.11f\n',k(3))6 f& l4 a, |: r- `( ^& i
fprintf('\tk4 = %.11f\n',k(4))
8 g( N) F( ~' Y( t& rfprintf('\tk5 = %.11f\n',k(5))2 n" Y' V5 X5 Z, j0 q1 m4 h
fprintf('\tk6 = %.11f\n',k(6)): {/ z, |" ~/ Z0 e! q8 u9 o8 B
fprintf('\tk7 = %.11f\n',k(7))
5 p& a( O! y& @fprintf('\tk8 = %.11f\n',k(8))9 ~7 j, s: ]% _9 ]# |. c; _
fprintf('\tk9 = %.11f\n',k(9))
. d( G$ ^% i t: x7 N1 K4 Rfprintf('\tk10 = %.11f\n',k(10))
$ b' o6 e. _0 V9 e( tfprintf(' The sum of the squares is: %.1e\n\n',resnorm)* q6 a" y4 G, v: e4 t
k_ls = k;
% q% T! n* _* d5 ]! |, ?output
0 v5 g/ ^/ f7 c* {6 U3 c6 Zwarning off8 I/ }+ l! {; L5 r; M* }$ g
% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
7 |+ B0 B! j9 b" U, }6 D1 `; Uk0 = k_fm;
* k) c; J# F! M0 r0 \0 c& c, u[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
7 ~* c F* L: V0 S- e* R$ f lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
: ` ?. k5 y8 Z( W$ A# l# Yci = nlparci(k,residual,jacobian);; q! ~# T/ W' f1 g& k1 B( K
fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')# R% m. l: D* x$ a' O
fprintf('\tk1 = %.11f\n',k(1))
6 d; _. v- g8 O7 C, T; Vfprintf('\tk2 = %.11f\n',k(2))
$ m4 w7 w, R$ o4 ?+ o) Qfprintf('\tk3 = %.11f\n',k(3))
1 A; D, `- M( l! W1 a) w7 Wfprintf('\tk4 = %.11f\n',k(4))
9 ?3 W5 j4 Q9 j" F, C6 Qfprintf('\tk5 = %.11f\n',k(5))) r0 \" L! A9 T& ~6 W
fprintf('\tk6 = %.11f\n',k(6))
2 T3 k _" V) l$ s5 T7 O K) sfprintf('\tk7 = %.11f\n',k(7))
; y2 }$ {+ g, p) ffprintf('\tk8 = %.11f\n',k(8))4 K1 u6 L2 T5 f( X* Z3 |
fprintf('\tk9 = %.11f\n',k(9))% M: g O- p: U$ j. Y8 w
fprintf('\tk10 = %.11f\n',k(10))9 k/ m5 l/ [7 `! w* F
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
( p/ s- r; V+ o0 z$ c- ~% ^k_fmls = k;
" u) p: i4 ^4 [" y3 b+ y/ z boutput
0 b2 f8 r( m/ I) W6 a. r8 ]tspan = [0 15 30 45 60 90 120 180 240 300 360]; P4 t6 m9 f2 \6 W
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); 4 a+ k/ I; O2 m- _6 B- Z
figure;
' v3 P) O/ Y4 @# vplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
9 O7 J( E6 N% O) e& J# [figure;plot(t,x(:,2:5));
* X0 G" }2 e- g! pp=x(:,1:5)
! U7 r7 v4 X, J& g; {hold on* A; u: j/ }- J8 }9 ?
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')+ l! F) i* z& w& i2 B( s9 w
2 K3 V& S: E: \' \6 j0 P6 l5 h+ B0 s8 q2 y9 {. I) A) D# z
}' E% D- N, A7 a1 i& c# |( n; pfunction f = ObjFunc7LNL(k,x0,yexp)
" {( b0 x$ N0 ^tspan = [0 15 30 45 60 90 120 180 240 300 360];0 m& H, i, l5 ^$ M
[t, x] = ode45(@KineticEqs,tspan,x0,[],k); / }# \2 l* t9 ?1 E
y(:,2) = x(:,1);2 M; i& |: J4 t0 V J; {+ y2 n+ q
y(:,3:6) = x(:,2:5);
8 A* T5 G! [: O- y1 H( s$ `$ Af1 = y(:,2) - yexp(:,2);' b7 \* {. |) g( A8 w' v
f2 = y(:,3) - yexp(:,3);
, a: a4 c- {8 a- gf3 = y(:,4) - yexp(:,4);! g' K5 E" j5 Q) R, W1 g2 G% k! |
f4 = y(:,5) - yexp(:,5);
7 e; b2 `4 ^" ]- T( q, n+ ef5 = y(:,6) - yexp(:,6);
$ |$ _. J2 i* e ~& Gf = [f1; f2; f3; f4; f5];
8 s; L; t: X R8 N& T6 g; J) [1 l( w, k9 a7 \$ F, c
) ^8 F9 n a; v: N& S) [
0 o/ ]8 W W* v+ e8 ~function f = ObjFunc7Fmincon(k,x0,yexp)
4 O0 `' ~& u- ]; s1 J5 Y% gtspan = [0 15 30 45 60 90 120 180 240 300 360];3 ?1 P6 t: K$ G7 j. A! Y2 X
[t x] = ode45(@KineticEqs,tspan,x0,[],k); 8 w( h, r* S+ v' N
y(:,2) = x(:,1);
- w5 Z. N6 W+ o) r# `* e) Ay(:,3:6) = x(:,2:5);9 \ f8 w8 d! v/ p8 v/ ]& k
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) .... w" N. R. M% Y9 Z1 B2 ?9 T% `/ a
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...) D& w* J' R4 L$ g. q t
+ sum((y(:,6)-yexp(:,6)).^2) ;
0 s" ]$ f2 ^- V% ^ m' Y1 g2 F- i% l8 M& z6 K3 D- F
% W7 [! ]2 V% i1 @* w9 b1 }& P H* f }3 x3 Z) V
: Y; `8 `' u2 G6 ~; ~' @, j9 Nfunction dxdt = KineticEqs(t,x,k)
3 a0 I. i% J# z6 ?# W& @. XdGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
9 ?/ S% s* M' {# hdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);9 Q1 q6 u0 p/ A: m0 U7 R
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);4 R ~$ ~0 q; X1 f9 }( t( v
dLadt = k(7)*x(5); }7 u# O6 ^1 O3 V5 C% H
dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
) b: p+ } h' Xdxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];7 C: P1 Z: S: M0 }# x9 G
: X" O2 \. Y5 ]2 O6 c! T8 b+ q' }* c' c2 D
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