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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit& b6 L- s' {; P/ h
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k47 |* x- ^5 l% g. Q! o |; O
% k6->k6 k7->k77 c. q# J( N3 {# P _: F2 @
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
$ g V( U. _; }( J# p# |+ o! {% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);
$ C8 D& n& Q) e g$ C% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);
1 B" I- X/ \) x% S! K+ g3 Q6 h% dLadt = k(7)*C(Hmf);
$ ]4 x3 X' C, l! p, q; P%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
9 k C! |; g9 X9 C0 w7 Sclear all
# h/ a: n, \1 S0 M G5 d8 Gclc
/ I- l9 t0 W/ E8 I1 tformat long
- t+ n5 O# P1 {+ g% t/min Glc Fru Fa La HMF/ mol/L
" ~. B( b: k# D9 H* Z Kinetics=[0 0.25 0 0 0 03 K; D5 J, z/ u9 o. ^4 f7 N0 Y2 \
15 0.2319 0.01257 0.0048 0 2.50E-04
* w( X* y) j5 W6 C* X$ Q/ ? 30 0.19345 0.027 0.00868 0 7.00E-04
* {$ S- D' Z. ?9 W/ u( Q 45 0.15105 0.06975 0.02473 0 0.0033
. P/ j4 \0 m, m% w# G8 o+ v- s; w 60 0.13763 0.07397 0.02615 0 0.00428
# }6 D' d7 n) B) b8 j5 q! R 90 0.08115 0.07877 0.07485 0 0.014052 }6 |+ S9 z/ h6 {# M* r; I
120 0.0656 0.07397 0.07885 0.00573 0.021434 {+ v2 v( C0 y/ E' N% Z) k. h8 Y
180 0.04488 0.0682 0.07135 0.0091 0.036239 H- R7 U( U$ n" D5 v" i
240 0.03653 0.06488 0.08945 0.01828 0.05452
3 s; [8 O( c: m! U' i; G R 300 0.02738 0.05448 0.09098 0.0227 0.0597
! R9 e3 z6 @' a3 v 360 0.01855 0.04125 0.09363 0.0239 0.06495];
' e' {! U: F# ?k0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值9 ^2 w a: ?5 R6 _, j, s8 F! q
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限( e" S# h8 }' U9 x* j# |
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限0 @" H+ @) }+ U9 \7 l' R9 g
x0 = [0.25 0 0 0 0];
7 ?# f" D0 d5 k9 n6 [& Xyexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]6 F9 b( O4 |' y v- p, L
% warning off
2 K7 M$ s3 }' V9 l% 使用函数 ()进行参数估计: o$ a( x6 N6 ~3 i0 W! O3 |& C J
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
; K9 ?8 `, ], Y4 Ifprintf('\n使用函数fmincon()估计得到的参数值为:\n')' J$ J; D% h' r8 ^, t# h8 L
fprintf('\tk1 = %.11f\n',k(1)). i/ @3 Q! a0 W/ a; C
fprintf('\tk2 = %.11f\n',k(2))8 B6 Y/ ^+ m' z5 R
fprintf('\tk3 = %.11f\n',k(3))1 ~+ J/ f# t6 M; r! C7 d
fprintf('\tk4 = %.11f\n',k(4)), v2 [" ~# g: f! ]
fprintf('\tk5 = %.11f\n',k(5))+ `3 v# {3 Y$ g4 _* X
fprintf('\tk6 = %.11f\n',k(6))7 t9 l; U/ n" C7 {8 q+ [
fprintf('\tk7 = %.11f\n',k(7))" q- l! L) T* z! F. ` }( M
fprintf('\tk8 = %.11f\n',k(8))
9 p/ J) \# a' t, Xfprintf('\tk9 = %.11f\n',k(9))
9 G# W3 C( \0 ^# m- c1 r4 k1 Ofprintf('\tk10 = %.11f\n',k(10))2 H# K1 q5 |: A; }2 n: |; A3 k
fprintf(' The sum of the squares is: %.1e\n\n',fval)
1 L y8 C9 Z, B; C, [8 ek_fm= k;
0 W/ Z8 J$ h) K& N. p j% warning off% Y, U( [8 `. I% B
% 使用函数lsqnonlin()进行参数估计, y8 H* N% u2 h9 ?, D7 d
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...: E, T2 K9 M6 i( D E
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
- f* a6 T% e0 I7 q3 E+ t( n& ~3 {2 zci = nlparci(k,residual,jacobian);
# R' @9 `$ ?' |8 vfprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
' z6 X# t8 U; ~$ M7 w/ U* Jfprintf('\tk1 = %.11f\n',k(1))
- P& b) `' P3 Q( E$ [. E# Ofprintf('\tk2 = %.11f\n',k(2))+ y! V7 ?8 M) R7 P; E; W
fprintf('\tk3 = %.11f\n',k(3))
6 A) t( \* `3 Kfprintf('\tk4 = %.11f\n',k(4))
) i7 j9 T+ H6 ^, Ufprintf('\tk5 = %.11f\n',k(5))8 R* w+ `, S# ^& n( |4 Q
fprintf('\tk6 = %.11f\n',k(6))
5 H: c. p7 ^3 H! M S: Zfprintf('\tk7 = %.11f\n',k(7))& J4 B1 ] Z1 o k0 ]
fprintf('\tk8 = %.11f\n',k(8))0 h) O6 g( V& g/ J8 r1 ~# s! m5 _
fprintf('\tk9 = %.11f\n',k(9))
. H9 r) M% P) n) lfprintf('\tk10 = %.11f\n',k(10))
$ c3 K4 a- L2 @) rfprintf(' The sum of the squares is: %.1e\n\n',resnorm)& V8 n+ o9 l; V# g9 L
k_ls = k;
& V7 F5 p) I# q8 |4 [5 ooutput
* X; j+ Q# O+ p5 N! Zwarning off
" `3 Y" \3 i% g6 D5 O! u. \% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
9 |2 C: L* Y( h0 e1 ~* C- _k0 = k_fm;
) q* }% B" C, {[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...9 p8 A# {" \8 X
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ; ~$ l9 D: `" c& P% W
ci = nlparci(k,residual,jacobian);
9 j7 p6 g+ L# e& ~0 K4 Xfprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')
. ^, }2 R( J Z/ ^fprintf('\tk1 = %.11f\n',k(1))
6 s6 f# }: y/ i7 T8 v6 Ffprintf('\tk2 = %.11f\n',k(2))
: \- ^5 o' \9 L6 L0 H/ C4 H; U9 Bfprintf('\tk3 = %.11f\n',k(3))" Y5 p1 T- x6 H/ z% |7 z2 g8 H/ y7 S
fprintf('\tk4 = %.11f\n',k(4))
v; E# ^- ]- o7 bfprintf('\tk5 = %.11f\n',k(5))
! a# k5 s4 H/ o& Cfprintf('\tk6 = %.11f\n',k(6))8 }( K4 a4 j$ h; ^6 R
fprintf('\tk7 = %.11f\n',k(7))5 A5 U' z3 ?1 m( N, O$ m3 [. _
fprintf('\tk8 = %.11f\n',k(8))
) u6 l" y4 b: w5 T h' Efprintf('\tk9 = %.11f\n',k(9))
9 j b7 m# ~2 {$ _. j. i; ]: X3 Kfprintf('\tk10 = %.11f\n',k(10))* P+ c3 P: h6 u# ]6 @* _
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)
1 h+ A% A( P) @) q$ @: Kk_fmls = k;
! T2 u8 x% j! J* Doutput% ?2 K: | O* j' y6 m
tspan = [0 15 30 45 60 90 120 180 240 300 360]; J6 P; `$ [3 O w* h' v
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); 2 o" ^8 ?5 b s# P: {+ G
figure;
6 B# Z9 {* V" f9 f$ o S, f: cplot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
9 C X0 D/ \/ _2 n' N i: z# |" v* Sfigure;plot(t,x(:,2:5));( T& x4 W4 T) u L7 K
p=x(:,1:5)2 b; O" y3 u7 N3 |/ x7 }3 |3 E
hold on
! [. B2 X9 [/ L+ u2 Dplot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
$ I* J' {8 y9 \$ ]. Z* E! @8 t* ]
. i& a& f) w9 o# i* P2 u& ]! H' J$ L& q1 a2 g, L- b7 v* T3 M
6 Y% D* |7 g7 {/ t: a3 x& p! p" b, ufunction f = ObjFunc7LNL(k,x0,yexp)
! K8 I+ G4 `, G' o( z& T t0 gtspan = [0 15 30 45 60 90 120 180 240 300 360];
6 |# [- }* \. N* X, d1 P$ l[t, x] = ode45(@KineticEqs,tspan,x0,[],k); $ L( r1 H$ }# t. ~: q1 V
y(:,2) = x(:,1);' F, _4 u1 l" u% v5 A/ {6 b& ?6 N
y(:,3:6) = x(:,2:5);6 V6 b6 K5 T' \0 f
f1 = y(:,2) - yexp(:,2);
$ |9 A2 B! B7 M/ `! C, Kf2 = y(:,3) - yexp(:,3);" |* B! S5 b) ]) I, E* S+ _
f3 = y(:,4) - yexp(:,4);
! W1 L! [( M% J, T; K$ {5 r t6 Uf4 = y(:,5) - yexp(:,5);- D; E7 l: R4 ?, e* p+ E) |
f5 = y(:,6) - yexp(:,6);! E7 h b# P" `+ Q. V# y+ A7 K
f = [f1; f2; f3; f4; f5];1 Q% ~2 B. r' e* A' Y, \8 t% u
3 c- ?( b/ _! e1 v# {
* h: L( g$ O5 J5 p0 u* Z$ v( I# A9 B% K
function f = ObjFunc7Fmincon(k,x0,yexp)
9 d! F4 m j0 i. _2 s7 \tspan = [0 15 30 45 60 90 120 180 240 300 360];
$ R8 T9 g7 g/ n5 [0 a. H+ R1 F[t x] = ode45(@KineticEqs,tspan,x0,[],k); + q9 ]1 a% M* f. j. A
y(:,2) = x(:,1);
) `; p" Z7 |2 R% I p# I! @y(:,3:6) = x(:,2:5);
5 B! o* t' k$ ]4 _# L+ H0 k( s# wf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...8 e% h. _# I9 s1 D6 Y
+ sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...; p2 `1 J# k! b* @4 Q4 Y
+ sum((y(:,6)-yexp(:,6)).^2) ;
* i( F' r6 J. T7 {( l/ q; ~6 I) T( b- x* H1 E# Z
7 y5 i3 B7 X. h3 w9 p; F) A. w% Q7 G- X4 Y' z6 P) T
% U7 x8 D! b8 i" Zfunction dxdt = KineticEqs(t,x,k)/ h7 s: R) j. y# S4 R
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);& e; X0 n) S4 u' b( I
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);, |) C. J" `7 Q+ Z0 K
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);
) Y. _- F/ i# fdLadt = k(7)*x(5);
5 D. B g1 o7 S2 YdHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);* t0 J& ]+ Z' m5 `! C3 j
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
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8 [" q7 [* \5 N. O
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