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Maximum Likelihood Method on The Construction of $ ]+ }1 [" J7 N
Phylogenetic Tree for Identification the Spreading of
- S& ?. j/ b% w+ e) oSARS Epidemic 5 o' u) c' [- N. ] e; X
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There are several phylogenetic tree construction ; Y# w& s1 k+ N
methods that can be used to illustrate the spread of disease
. y2 a8 B- y8 O* j9 j+ b7 ]2 ]epidemics. One of the methods used is probability-based
% A }/ _2 c `6 |0 G. fmaximum likelihood. This paper explains how to identify the * J' E) p7 |6 b* q& D" I' ~
spread of the SARS epidemic in the world using the formation of * o6 {9 b1 Q# U5 Y3 B$ i
phylogenetic trees using the maximum likelihood method. The $ N0 q$ X+ Z/ \3 y7 h
output obtained was a description of the spread of SARS virus
# J2 q" [2 P9 nwith the selection of tree candidates after performing a heuristic
7 l+ _' O7 H# X" V# zsearch of the Stepwise Addition method. The result of the research
; [& g9 c' f( Z% L( zshowed that the closest distance to the palm civet is GZ 02/18/03
; X8 a! B: X1 `. k7 C7 F' uindicating that the initial spread of the SARS epidemic started
5 A: }' j) L/ n! R6 J+ w( a- bfrom Guangzhou.
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