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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit# k z$ C% T8 w$ S* y% A- Z
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4
2 B& K$ g- L9 O) S' F7 h% k6->k6 k7->k7! O- N4 T. W5 y* a+ V9 ]
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
" s& Y- V: \8 @- \; b+ z1 Y3 M% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);8 [* M8 G) h; u: A0 K# \
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);7 s/ k9 c+ F# s# j
% dLadt = k(7)*C(Hmf);
/ D0 h# |: r. e$ Y+ E. |: O%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
1 @) j: t, k) u- Y) bclear all
3 T% \9 _4 }) d n3 \# Sclc
7 N# ?: H4 I+ ^: \6 E" gformat long
4 @( N8 i% O! `% t/min Glc Fru Fa La HMF/ mol/L 0 s% ^" y9 |, C2 {. h* m* R! c
Kinetics=[0 0.25 0 0 0 03 h- x* _" T. x# Z8 b
15 0.2319 0.01257 0.0048 0 2.50E-04
8 O( p7 h7 q- U6 W5 ` 30 0.19345 0.027 0.00868 0 7.00E-04
( U5 L" Q9 ]4 I: p 45 0.15105 0.06975 0.02473 0 0.0033
& W" H) T) z4 C# R( F4 o- w 60 0.13763 0.07397 0.02615 0 0.004284 r2 [; {1 r' i, w4 e
90 0.08115 0.07877 0.07485 0 0.014050 ^5 e: {+ Q% o1 A& \2 D8 ]: h7 d
120 0.0656 0.07397 0.07885 0.00573 0.02143
; I& N4 K3 o k1 ~2 R7 D. M( T$ J 180 0.04488 0.0682 0.07135 0.0091 0.03623- o% a5 W/ h' j
240 0.03653 0.06488 0.08945 0.01828 0.05452
9 {) n6 W7 z) s( G 300 0.02738 0.05448 0.09098 0.0227 0.0597
; |; T* t) X9 r1 S 360 0.01855 0.04125 0.09363 0.0239 0.06495];
* s X$ ?! }, l2 Jk0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值
( d% X u/ Q4 xlb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限" |/ ^" H7 u5 ]! y0 F) S
ub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限" x$ s" R+ P$ J0 c. K a8 N
x0 = [0.25 0 0 0 0];2 ]7 o7 ~7 ~! h6 n* c
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]2 \2 D+ R& o/ V. B g
% warning off4 r R5 p- @0 a1 O' Z
% 使用函数 ()进行参数估计# f. E Z0 l: t& ]8 ~2 c, S
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);
2 t+ r z9 u9 H# [, s# p* ufprintf('\n使用函数fmincon()估计得到的参数值为:\n')/ E/ X& {0 f/ z
fprintf('\tk1 = %.11f\n',k(1))4 K% w, ~5 _2 c H
fprintf('\tk2 = %.11f\n',k(2))1 Y* B: W" @+ b
fprintf('\tk3 = %.11f\n',k(3))/ o$ D/ |/ {! q# ?, e' j2 ^& v
fprintf('\tk4 = %.11f\n',k(4))
7 ^& ?/ g; P9 c) m. `fprintf('\tk5 = %.11f\n',k(5))$ f$ s% c3 x/ {
fprintf('\tk6 = %.11f\n',k(6))
" F! E2 Z! t1 k& y, G7 wfprintf('\tk7 = %.11f\n',k(7))
& O1 {. _2 K3 U3 i, | Afprintf('\tk8 = %.11f\n',k(8))
/ Y, f$ n% K4 K1 Q5 G2 Gfprintf('\tk9 = %.11f\n',k(9))
- O9 y; d4 m' r" c1 |7 efprintf('\tk10 = %.11f\n',k(10))' r- m+ o; n" _- j1 [0 n
fprintf(' The sum of the squares is: %.1e\n\n',fval)
" h( C+ {) I( Z9 Nk_fm= k;
2 Z$ g$ d1 C/ ^& Y9 O4 I% warning off) {' S: u% j. H! M
% 使用函数lsqnonlin()进行参数估计1 F( z( _8 w" E9 G
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
; {( e! Y7 E' i# b0 \ lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); % Z7 V( u5 X0 o/ p
ci = nlparci(k,residual,jacobian);: C$ s! ^7 N' Y O; R& M4 z
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
6 {1 ~6 ?4 [) \2 y- d% Ifprintf('\tk1 = %.11f\n',k(1))
* ^: i3 m6 x" k9 D' ?9 sfprintf('\tk2 = %.11f\n',k(2))
. y3 u2 ]& I$ g+ d! r; \& _fprintf('\tk3 = %.11f\n',k(3))( G [2 ?- z7 M7 }# l" `$ H" Q
fprintf('\tk4 = %.11f\n',k(4))) @5 V" L% t9 P8 [
fprintf('\tk5 = %.11f\n',k(5))8 ~0 f$ \2 R6 B: G
fprintf('\tk6 = %.11f\n',k(6))/ R* c6 J" g) Y: D7 z/ i
fprintf('\tk7 = %.11f\n',k(7)), q6 ^8 V, s% G: _9 a
fprintf('\tk8 = %.11f\n',k(8))
/ \3 I2 n% p" m }4 Yfprintf('\tk9 = %.11f\n',k(9))
1 d! ^! }- I5 p$ hfprintf('\tk10 = %.11f\n',k(10))
( g( \- c2 W' x2 s: sfprintf(' The sum of the squares is: %.1e\n\n',resnorm)
: ?. l3 v% T; ~k_ls = k;
/ V5 M0 Z3 c4 Goutput8 J" w1 o: D0 S% ^9 k( H* P$ H
warning off
" J5 v0 g" L5 @5 G3 @1 W- a% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
* p5 b# n2 p; E N; r7 Q' Dk0 = k_fm;) K/ E# q6 |6 Q( \( v# I
[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
8 F! J* v; Z" A+ B! g" e6 r) J: |) j6 b lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp);
; n! c( {8 S) r9 bci = nlparci(k,residual,jacobian);
+ a6 Z8 g1 ?, X0 ?. gfprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')" o4 v7 K4 _+ f6 @3 W- V* B
fprintf('\tk1 = %.11f\n',k(1))
+ G% u' ~6 E& T: |# Nfprintf('\tk2 = %.11f\n',k(2))/ e1 J7 w3 M7 U' Z! X1 v* ]
fprintf('\tk3 = %.11f\n',k(3))
8 T2 G5 c8 y5 D/ B8 ~fprintf('\tk4 = %.11f\n',k(4))
* w+ P: ` t& @) W% C" f1 Ifprintf('\tk5 = %.11f\n',k(5))
9 t9 [" l7 Z7 ?) g3 \fprintf('\tk6 = %.11f\n',k(6))$ h/ i( |* z/ \! q% i" ^
fprintf('\tk7 = %.11f\n',k(7)) R4 v/ U3 K5 y' k1 R. E0 Q
fprintf('\tk8 = %.11f\n',k(8)) Y3 ~( B2 c. W) ^2 n! O6 Z
fprintf('\tk9 = %.11f\n',k(9))# U1 }+ @' x! c6 J8 l
fprintf('\tk10 = %.11f\n',k(10)). [( E. M/ h* K
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)0 i2 S# Q: }% C# ]. F
k_fmls = k;/ ]# v: {, j; z0 N9 L; n; r5 M6 i
output) \) i$ C5 T' e0 J7 K( O$ w
tspan = [0 15 30 45 60 90 120 180 240 300 360];7 u% l9 L6 s3 {! M7 u2 {
[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); 5 s& E* Q7 s+ _
figure;& |2 e6 M) N& x; i5 o2 c1 C# z, w: Y
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
! P, Q4 e* {8 G+ P* O' B7 t+ G* Ifigure;plot(t,x(:,2:5));
- |+ K: y2 Q& Yp=x(:,1:5)& @/ R! v( v( o* Z/ v+ [7 U( h5 [# s
hold on& z7 j8 q% F) h
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')/ B1 A" z: u4 Z1 c+ O+ B
" t: u3 s C% m2 {9 R- c& \
2 r& W7 q3 S* E% O) T0 m
) Z! ]6 `/ P2 X0 q. [6 V- V, f4 efunction f = ObjFunc7LNL(k,x0,yexp)) v/ s& f3 C2 x7 n! X, H
tspan = [0 15 30 45 60 90 120 180 240 300 360];
' M$ _: a8 E2 I A# A/ q" E7 B[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
c4 f) o, J/ I$ Ty(:,2) = x(:,1);
4 d9 \% ^ w# o: G+ _5 Qy(:,3:6) = x(:,2:5);
1 K% K3 M5 r' P/ E1 o$ j2 Hf1 = y(:,2) - yexp(:,2);$ w# W0 E5 `- }
f2 = y(:,3) - yexp(:,3);: h2 D( O1 e4 p% k
f3 = y(:,4) - yexp(:,4);" F* | D5 V' R$ t N7 {
f4 = y(:,5) - yexp(:,5);$ H6 i# w! a( z. M; l! k: p
f5 = y(:,6) - yexp(:,6);
9 O6 }+ P1 H, M! pf = [f1; f2; f3; f4; f5];4 t4 z6 u9 {! S3 v m4 e: |" z0 ? n
- R' u3 e" H$ P7 P7 E9 D
: n" G6 f2 ]" P4 c+ g6 [) C1 _, x
function f = ObjFunc7Fmincon(k,x0,yexp)/ n' S. }& h% M' B3 N7 n
tspan = [0 15 30 45 60 90 120 180 240 300 360];
) b* _" _, j; e) {2 [$ J: ~6 U- l[t x] = ode45(@KineticEqs,tspan,x0,[],k); . {6 v8 h/ ` J$ u# T, c( u4 W
y(:,2) = x(:,1);8 ?, n p6 |. J3 f+ v F$ {/ R; S- q
y(:,3:6) = x(:,2:5);
5 D, O. B( G* y: qf = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
" v( u7 [5 R; h, C/ H" @3 I6 | + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) ...
9 e; U9 j' \ w& }4 b* H: f) @) o- x& u + sum((y(:,6)-yexp(:,6)).^2) ;
* F! h, k$ d o+ F( \% g$ w$ o1 \1 `# n. Y' Y2 z( F
; I" z" X9 C& X' a" J9 a" x5 }# }, V/ `# f
0 X3 r' W( M) F9 d6 d% f! Q
function dxdt = KineticEqs(t,x,k)0 A) G3 v. J) X6 j/ o1 Q
dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);
+ ^! U6 _/ z+ O, z* k4 QdFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);
( m9 P# q* n8 V: Z2 D# g& WdFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);- A4 u( \2 Z% N2 F4 c, E0 U* v1 x: c
dLadt = k(7)*x(5);
+ ]0 j1 I9 K5 I x" |7 M, ~dHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);
4 g! {; N8 E+ R0 \# H4 @! x6 ydxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];
& q1 p( x6 F. |; ~, V6 P
8 l! [; N, R' ?: S6 _( H) ]7 v
$ g3 X! \5 [7 S. i( [; L! J |
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