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升级   87.37% TA的每日心情 | 无聊 2015-10-10 18:19 |
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签到天数: 24 天 [LV.4]偶尔看看III
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10体力
function parafit& b) c1 f1 Q( h+ O) ^3 l
% k1->k-1,k2->k1,k3->k2,k4->k3,k5->k4" D: I+ y/ y5 U( W0 _
% k6->k6 k7->k7' E* y# V& L. A# d
% dGlcdt = k-1*C(Fru)-(k1+k2)*C(Glc);
. E% V% G5 @$ y z2 A% dFrudt = k1*C(Glc)-(k-1+k3+k4)C(Fru);. V% e4 T; Q7 v K5 e
% dFadt = k(2)*C(Glc)+k4*C(Fru)+(k6+k7)*C(Hmf);0 U/ r/ f+ e5 X2 C8 |8 p
% dLadt = k(7)*C(Hmf);
) F- p: I* J- c$ r% s%dHmfdt = k(3)*C(Fru)-(k6+k7)*C(Hmf);
$ Y& Z3 i$ T& U& ]" L; g* gclear all5 c+ \$ I& \9 s* [; P5 K x* o
clc
& L! `+ J8 ^2 p! z) Zformat long9 c3 D4 t7 m. L( L
% t/min Glc Fru Fa La HMF/ mol/L
) K& l1 @. J, {% ?5 X# { Kinetics=[0 0.25 0 0 0 0
& p$ q3 | K, r% A; Z# r 15 0.2319 0.01257 0.0048 0 2.50E-043 o( b, f, c+ [, o, w( R
30 0.19345 0.027 0.00868 0 7.00E-04
. D' ^0 e3 x4 P6 q, L 45 0.15105 0.06975 0.02473 0 0.0033
, s' v5 `* r3 }3 K. l8 P 60 0.13763 0.07397 0.02615 0 0.00428
( X. o0 O: ^1 v( k6 ~2 ?0 T8 L- n 90 0.08115 0.07877 0.07485 0 0.01405
3 J4 s; U4 R- {' j _8 F 120 0.0656 0.07397 0.07885 0.00573 0.02143
+ A. v q6 U" i8 J: ~' f; q 180 0.04488 0.0682 0.07135 0.0091 0.03623
h7 ~ {/ h# M+ t( d" C 240 0.03653 0.06488 0.08945 0.01828 0.05452
" M3 A! `( y6 ?; d, i4 z/ f 300 0.02738 0.05448 0.09098 0.0227 0.0597
6 T$ v0 \( }& n5 B0 W- Y6 H$ i 360 0.01855 0.04125 0.09363 0.0239 0.06495];
6 `: a8 `( H# W) l5 z3 Ck0 = [0.0000000005 0.0000000005 0.0000000005 0.00000000005 0.00005 0.0134 0.00564 0.00001 0.00001 0.00001]; % 参数初值! x8 Q* J8 Y- o0 s, E1 O* b' J
lb = [0 0 0 0 0 0 0 0 0 0]; % 参数下限
d3 z1 t5 H: t8 R2 ]8 ~) cub = [1 1 1 1 1 1 1 1 1 1]; % 参数上限
3 M" {# p9 s2 f, \3 d8 {* rx0 = [0.25 0 0 0 0];0 d' C1 @# `: J$ d1 L, D+ V2 B
yexp = Kinetics; % yexp: 实验数据[x1 x4 x5 x6]4 B# o! w3 l1 w8 ?6 p0 R8 A- e
% warning off
# k3 {0 B- x2 ?, f% 使用函数 ()进行参数估计" t6 Y) F4 k2 C. G- p/ K$ e" l+ \2 N
[k,fval,flag] = fmincon(@ObjFunc7Fmincon,k0,[],[],[],[],lb,ub,[],[],x0,yexp);6 i6 Y+ ?* }5 Y- M7 P9 x p
fprintf('\n使用函数fmincon()估计得到的参数值为:\n'). D, T) G) c# d/ a; x
fprintf('\tk1 = %.11f\n',k(1))1 c" F# c8 |. o, g8 T, n* J+ V; F
fprintf('\tk2 = %.11f\n',k(2))+ z \0 \4 t) |" v5 A+ ?1 A
fprintf('\tk3 = %.11f\n',k(3))
( _9 D. B4 U! l% l2 Wfprintf('\tk4 = %.11f\n',k(4))& l$ `6 P! a8 ~* Q5 M8 P! F# C
fprintf('\tk5 = %.11f\n',k(5))
' X) V$ M* ^) Y) u# Q) lfprintf('\tk6 = %.11f\n',k(6))
5 `* _9 l: ]6 W% Vfprintf('\tk7 = %.11f\n',k(7))
, ]7 t( d) U0 w* sfprintf('\tk8 = %.11f\n',k(8))8 Z/ m3 T# X0 W J4 E
fprintf('\tk9 = %.11f\n',k(9))4 p% p% P; v2 N6 Q9 X |! m1 @/ \- `
fprintf('\tk10 = %.11f\n',k(10))! }9 k1 ?& o5 x/ o- o+ M& E
fprintf(' The sum of the squares is: %.1e\n\n',fval)# A1 D6 [2 Q, s8 d9 S
k_fm= k;
4 e) n# B0 I+ C2 C2 J! c$ h7 T q+ H% Z% warning off
8 Y5 f4 R, Z! q$ T, d% 使用函数lsqnonlin()进行参数估计
7 U# C9 D& u' h[k,resnorm,residual,exitflag,output,lambda,jacobian] = ...
+ G2 D6 ]) {6 |3 m+ \( V lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); - m! W- ~/ r( n$ x2 S3 v/ C. r
ci = nlparci(k,residual,jacobian);6 w$ E& @5 w. l) Y
fprintf('\n\n使用函数lsqnonlin()估计得到的参数值为:\n')
5 j# A- {$ ^6 m1 L; C+ pfprintf('\tk1 = %.11f\n',k(1))0 L o; U1 q4 X" L9 Y2 l
fprintf('\tk2 = %.11f\n',k(2)), }; u$ v2 r% V1 s
fprintf('\tk3 = %.11f\n',k(3))8 Q, K* Q. \/ [1 }
fprintf('\tk4 = %.11f\n',k(4))
( {) Q4 E2 B; Z7 Nfprintf('\tk5 = %.11f\n',k(5))* m( N `9 r$ I
fprintf('\tk6 = %.11f\n',k(6)). x" n/ _! N$ v5 g. N9 l! `0 R
fprintf('\tk7 = %.11f\n',k(7))
2 N* T8 h* }' {1 v3 d7 r# P2 ?, Sfprintf('\tk8 = %.11f\n',k(8))
`' T) _) M* y3 e% C$ Ofprintf('\tk9 = %.11f\n',k(9)) D, c# b! o% ^( q
fprintf('\tk10 = %.11f\n',k(10))# }' Z+ S$ v5 G
fprintf(' The sum of the squares is: %.1e\n\n',resnorm)! N# b6 [+ Z& S& ?% z" W. i% n$ H
k_ls = k;
6 i" y% n1 ^' ^& D7 F# boutput4 [1 n5 h! x1 E Q( ]- ^. b
warning off
9 w# r3 Y5 A' O( m! H4 C% 以函数fmincon()估计得到的结果为初值,使用函数lsqnonlin()进行参数估计
& A, k8 u- F* lk0 = k_fm;" G! W! O3 I( w" p. N3 ?
[k,resnorm,residual,exitflag,output,lambda,jacobian] = .... A7 n4 ?5 `# G q
lsqnonlin(@ObjFunc7LNL,k0,lb,ub,[],x0,yexp); ) V$ {/ r. x9 q% o' b5 C
ci = nlparci(k,residual,jacobian);
* M( U" V% Y% b) S! @fprintf('\n\n以fmincon()的结果为初值,使用函数lsqnonlin()估计得到的参数值为:\n')( x4 k+ F( L. b
fprintf('\tk1 = %.11f\n',k(1)). D( ]' l2 V: A1 Y9 o, L
fprintf('\tk2 = %.11f\n',k(2))$ I$ g5 L& v4 V0 Y
fprintf('\tk3 = %.11f\n',k(3))
) G+ I0 h( Z, U6 f; |( hfprintf('\tk4 = %.11f\n',k(4))0 a. _/ Z0 X2 |, ` l( M9 Z
fprintf('\tk5 = %.11f\n',k(5))
0 k0 H$ U6 a2 ?+ `4 w) [fprintf('\tk6 = %.11f\n',k(6))
! L: ]4 z: W0 e5 Y y" l( \fprintf('\tk7 = %.11f\n',k(7))
4 m3 e% w; D2 X1 S; N+ qfprintf('\tk8 = %.11f\n',k(8))
4 j( u' c1 ~$ M0 ^* Z3 Xfprintf('\tk9 = %.11f\n',k(9))
4 i- C7 p4 | Vfprintf('\tk10 = %.11f\n',k(10))
5 x3 p1 z6 T! X- F! K6 ffprintf(' The sum of the squares is: %.1e\n\n',resnorm)) F) W) c0 @4 B9 W! y) R
k_fmls = k;
8 L) V' D7 T: X* q; M [: Woutput: k: I q9 O+ N. O4 r* w& W
tspan = [0 15 30 45 60 90 120 180 240 300 360];
9 _- o% `9 ^$ @: G2 n" L[t x] = ode45(@KineticEqs,tspan,x0,[],k_fmls); # q) E8 U, y7 A! }
figure;1 I* h; `6 F" [; M
plot(t,x(:,1),t,yexp(:,2),'*');legend('Glc-pr','Glc-real')
! ?. Q& @$ }8 Ifigure;plot(t,x(:,2:5));1 a" Q2 Z" A/ Q0 V
p=x(:,1:5)
! y, Q1 J2 P- Q2 h) d+ T/ Shold on% j9 o3 |, e: V* z
plot(t,yexp(:,3:6),'o');legend('Fru-pr','Fa-pr','La-pr','HMF-pr','Fru-real','Fa-real','La-real','HMF-real')
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}3 d a7 T. a& K% X+ h
function f = ObjFunc7LNL(k,x0,yexp)3 Y) Y/ I& ^: ?) o, z6 `) L
tspan = [0 15 30 45 60 90 120 180 240 300 360];
2 s0 P) Q% S2 f, s[t, x] = ode45(@KineticEqs,tspan,x0,[],k);
' r; C. G; D. k- a) T5 D9 V4 vy(:,2) = x(:,1);
* b5 _5 U) E6 d: q& K& ^% ?. P& fy(:,3:6) = x(:,2:5);) d2 j7 h+ u) d! b
f1 = y(:,2) - yexp(:,2);% ?2 i- @: u9 ^, e/ z1 E
f2 = y(:,3) - yexp(:,3);7 e4 ~& @6 `3 ]- P7 e, y% c
f3 = y(:,4) - yexp(:,4);
. o5 C# A p+ Jf4 = y(:,5) - yexp(:,5);
0 H7 H4 q7 N- n. Q* U! I% Bf5 = y(:,6) - yexp(:,6);2 o; B" c5 P* ~. M5 Z; }3 \
f = [f1; f2; f3; f4; f5];( V- s+ j6 D) c. k
: I# f: W; | F( S) W- u
4 {1 Y; b8 N, G- a' E
5 S+ G9 F! D$ h0 D* q( Z& A( o
function f = ObjFunc7Fmincon(k,x0,yexp)8 x& j9 J5 c1 ~9 ?. }0 d% {
tspan = [0 15 30 45 60 90 120 180 240 300 360];6 P, ?" n- R0 ] A9 N3 K
[t x] = ode45(@KineticEqs,tspan,x0,[],k); * Q5 j8 x; W4 g# N! R" [
y(:,2) = x(:,1);
7 P" b: ^+ W& U- a5 o+ W: j6 Uy(:,3:6) = x(:,2:5);: c! f$ ~" ]" l# M _
f = sum((y(:,2)-yexp(:,2)).^2) + sum((y(:,3)-yexp(:,3)).^2) ...
- t" c- G, X+ m7 n/ A3 T + sum((y(:,4)-yexp(:,4)).^2) + sum((y(:,5)-yexp(:,5)).^2) .... d& Z& B5 U* o
+ sum((y(:,6)-yexp(:,6)).^2) ;
1 m2 ^: |1 Q1 w4 ]
b1 z2 b e) E: M, u. R4 q
( a2 _" n) Q3 ^7 ?4 V$ C5 @* \ @- G" c3 H' H8 X
: t1 z& t/ I( d6 b+ J4 J
function dxdt = KineticEqs(t,x,k)
* { c$ I! z# ?; A5 S) i: @dGldt = k(1)*x(2)-(k(2)+k(3)+k(8))*x(1);/ \, d* F- U7 W! u
dFrdt = k(2)*x(1)-(k(1)+k(4)+k(5)+k(9))*x(2);5 S ]+ P9 E& g
dFadt = k(3)*x(1)+k(5)*x(2)+(k(6)+k(7))*x(5);, y1 b J/ ]2 n# f
dLadt = k(7)*x(5);
* i3 m" ?/ ^& v8 adHmdt = k(4)*x(2)-(k(6)+k(7)+k(10))*x(5);6 i+ ?! e) ^& P+ K4 ^
dxdt = [dGldt; dFrdt; dFadt; dLadt; dHmdt];# Y+ M# g; l e/ u" q5 G
: U6 \3 A* V5 _1 ]0 j S% a
+ A# ^3 J4 @+ A |
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